explanation      blue bibcodes open ADS page with paths to full text
Author name code: barnes
ADS astronomy entries on 2022-09-14
=author:"Barnes, G." -aff:"NASA" 

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Title: What do pre-event conditions of the upper solar atmosphere
    tell us about potential flaring of active regions?
Authors: Dissauer, K.; Leka, K. D.; Barnes, G.; Wagner, E.
2021AAS...23812713D    Altcode:
  Although solar energetic events are powered by the evolution of the
  underlying magnetic field, it is still impossible to deterministically
  predict when an active region will flare or not solely based on this
  information. Observational case studies of the solar chromosphere and
  corona reveal increased levels of magnetic reorganization, dynamics and
  temperature variation prior to solar energetic events, however whether
  these activities play a role in event initiation is still unclear. <P
  />In order to investigate this question, we statistically analyze the
  coronal and chromospheric conditions prior to solar flares and during
  flare-quiet periods using data from the Atmospheric Imaging Assembly
  (AIA) onboard the Solar Dynamics Observatory (SDO). <P />We create
  and use AIA Active Region Patches (AARPs), region-targeted extractions
  of AIA time-series data in (extreme-) ultraviolet, matched to the HMI
  Active Region Patches (HARPs), for 2010-2018. The pre-event dynamics
  and heating of the upper solar atmosphere is characterized using
  high-order moments to parameterize brightness images, running-difference
  images as well as emission measure, temperature, and density images,
  derived from Differential Emission Measure (DEM) analysis. The temporal
  behavior is captured by the slope and intercept of a linear fit over
  a 7hr time-series of each parameter. <P />The NWRA Classification
  Infrastructure (NCI), a well-established statistical classifier system
  based on Non-Parametric Discriminant Analysis, and standard skill
  scores are used to statistically evaluate if parameters describing
  the pre-event conditions significantly differ for flaring-imminent
  vs. flare-quiet populations. Early results and their physical
  implications will be presented. <P />We note that AARPs present a
  newly developed AIA data product which will be freely available to the
  scientific community later in 2021. AARPs are presently constructed
  daily, from 15:48-21:48 UT in 13 min intervals each hour with a time
  cadence of 72 s, suitable for DEM Analysis. AARPs will be available
  with the study's publication and at www.nwra.com/AARP

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Title: Enhancements to Hinode/SOT-SP Vector Magnetic Field Data
    Products
Authors: DeRosa, M. L.; Leka, K. D.; Barnes, G.; Wagner, E.; Centeno,
   R.; De Wijn, A.; Bethge, C.
2021AAS...23821305D    Altcode:
  The Solar Optical Telescope Spectro-Polarimeter (SOT-SP), on board the
  Hinode spacecraft (launched in 2006), is a scanning-slit spectrograph
  that continues to provide polarization spectra useful for inferring the
  vector (three-component) magnetic field at the solar photosphere. SOT-SP
  achieves this goal by obtaining line profiles of two magnetically
  sensitive lines, namely the Fe I 6302 Angstrom doublet, using a
  0.16"×164" slit as it scans a region of interest. Once the data are
  merged, a Milne-Eddington based spectropolarimetric inversion scheme is
  used to infer multiple physical parameters in the solar photosphere,
  including the vector magnetic field, from the calibrated polarization
  spectra. All of these data are publicly available once the processing
  has occurred. <P />As of this year, the Hinode/SOT team is also making
  available the disambiguated vector magnetic field and the re-projected
  heliographic components of the field. In making the disambiguated vector
  field data product, the 180° ambiguity in the plane-of-sky component
  of the vector magnetic field inherent in the spectropolarimetric
  inversion process has been resolved. This ambiguity is resolved
  using the Minimum-Energy algorithm, which is the same algorithm used
  within the pipeline producing the vector-magnetogram data product
  for the Helioseismic and Magnetic Imager aboard the Solar Dynamics
  Observatory. The heliographic field components (B<SUB>phi</SUB>,
  B<SUB>theta</SUB>, B<SUB>r</SUB>) on the same grid as the inverted data
  are also now provided. This poster provides more details about these
  data product enhancements, and some examples on how the scientific
  community may readily obtain these data.

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Title: On Measuring Divergence for Magnetic Field Modeling
Authors: Gilchrist, S. A.; Leka, K. D.; Barnes, G.; Wheatland, M. S.;
   DeRosa, M. L.
2020ApJ...900..136G    Altcode: 2020arXiv200808863G
  A physical magnetic field has a divergence of zero. Numerical error
  in constructing a model field and computing the divergence, however,
  introduces a finite divergence into these calculations. A popular metric
  for measuring divergence is the average fractional flux $\left\langle
  | {f}_{i}| \right\rangle $ . We show that $\left\langle | {f}_{i}|
  \right\rangle $ scales with the size of the computational mesh, and
  may be a poor measure of divergence because it becomes arbitrarily
  small for increasing mesh resolution, without the divergence actually
  decreasing. We define a modified version of this metric that does
  not scale with mesh size. We apply the new metric to the results of
  DeRosa et al., who measured $\left\langle | {f}_{i}| \right\rangle
  $ for a series of nonlinear force-free field models of the coronal
  magnetic field based on solar boundary data binned at different spatial
  resolutions. We compute a number of divergence metrics for the DeRosa et
  al. data and analyze the effect of spatial resolution on these metrics
  using a nonparametric method. We find that some of the trends reported
  by DeRosa et al. are due to the intrinsic scaling of $\left\langle |
  {f}_{i}| \right\rangle $ . We also find that different metrics give
  different results for the same data set and therefore there is value
  in measuring divergence via several metrics.

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Title: Pathways to Coronal Magnetic Energy Storage in The NOAA AR11283
Authors: Cavins, A.; Barnes, G.; Leka, K. D.; Gilchrist, S. A.
2019AGUFMSH31D3332C    Altcode:
  At the extreme end of the variability spectrum, powerful events
  we call solar flares produce orders-of-magnitude increases
  in the shorter-wavelength luminosity output on millisecond
  time-scales. Although it is generally accepted that solar flares
  occur through the release of energy stored in the coronal magnetic
  field above an active region it is not well understood how much of
  the stored energy will be released in a single event. When examined
  with a large sample size, solar flares generally follow a power-law
  distribution in size, although it should be noted that this may not
  be the case for any individual active region. Such is the case for
  NOAA AR11283 (at central meridian on 2011.09.06), which produced
  multiple M and X-class flares with comparatively few smaller C class
  flares. The objective of the ongoing research on this region is to
  compare estimates of the magnetic energy stored by individual current
  systems with the region's flaring history. The investigation heavily
  focuses on studying energy of sub volumes in the region, identified
  from spherical nonlinear force-free modelling, rather than the whole
  region in an attempt to better understand the magnitude of single
  re-connection events. A small total current along shorter field
  lines generally does not store a large amount of magnetic energy,
  but either current along longer field lines or a larger total amount
  of current present in the individual system can lead to more magnetic
  energy storage. These different situations of current size versus
  current loop length can produce different distributions of energy
  throughout the region. This material is based upon work supported by
  the US National Science Foundation under Grant No. 1630454 and the REU
  Program Award No. 1659878. Any opinions, findings, and conclusions or
  recommendations expressed in this material are those of the authors and
  do not necessarily reflect the views of the National Science Foundation.

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Title: The How and Why of Big Solar Flares
Authors: Isola, B.; Barnes, G.; Leka, K. D.; Gilchrist, S. A.
2019AGUFMSH31D3336I    Altcode:
  It is generally understood that the peak soft X-ray flux of solar
  flares emanating from active regions follows a power-law spectrum of
  magnitudes; however, it is not understood why the flares from some
  active regions do not obviously exhibit this distribution. We take
  here an approach to understand why this occurs, by combining modeling
  and observation to study the energy reservoirs within a solar active
  region and the pathway the energy takes to produce solar events. We
  consider a complex active region, NOAA AR 11793 from July 19th, 2013,
  that was expected to produce larger flares than the actual C-flares
  observed. We modeled the coronal magnetic field using the CFITS
  nonlinear force-free extrapolation code, then identified individual
  current systems by starting from photospheric concentrations of current
  and propagating those through the extrapolation volume. We estimated the
  energy-release prospects of each current system as a measure of how much
  energy might be released in a single reconnection event. We investigated
  different ways of determining the current systems to investigate the
  sensitivity of the results to the choice of current systems. We present
  here results comparing the energy associated with the individual
  current systems with the magnitude of the flares originating from
  our region. <P />This material is based upon work supported by the
  US National Science Foundation REU program under Award No. 1659878,
  and NSF Grant No. 1630454. Any opinions, findings, and conclusions or
  recommendations expressed in this material are those of the authors and
  do not necessarily reflect the views of the National Science Foundation.

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Title: Effects of particular smoothing processes for global synoptic
    maps on PFSS solutions
Authors: Hayashi, Keiji; Leka, K. D.; Barnes, G.
2019shin.confE.135H    Altcode:
  Recent space-based and ground-based solar observations produce
  high-resolution synoptic maps that capture magnetic features at
  various spatial scales, such as small magnetic elements, plages,
  sunspot regions, as well as large-scale unipolar magnetic regions
  (UMRs). Because high-resolution PFSS solutions are computationally
  expensive and because the lifetimes of small-scale magnetic features
  are much shorter than one Carrington rotation period, it is a common
  practice to reduce the spatial resolution of synoptic maps to employ
  lower-order PFSS solutions. <P />As demonstrated in our earlier
  work [Hayashi et al., 2016], different size-reducing (smoothing)
  methods often alter the PFSS solution substantially. For example, a
  simple box-car averaging can suffer the so-called aliasing effect: A
  averaging box can contain substantially different amount of total signed
  flux than would the same-sized box but shifted by a few degrees in
  longitude, in particular for regions in and near pairs of strong-field
  sunspots. Such small-scale systematic differences in smoothed/resized
  map can cause substantial differences in the resulting global-scale
  PFSS solutions, such as the position and shape of the heliospheric
  current sheet (HCS). The Gaussian-type smoothing method mitigates
  such differences, although it eliminates several of the advantages
  gained by using high-resolution observations in the first place. In
  addition, the averaging/smoothing can alter the total unsigned fluxes
  and horizontal gradients, in particular, in the strong-field sunspot
  regions that are crucial for studies on energy build-up processes
  and data-driven modeling. <P />We examine differences among the PFSS
  solutions of the global solar corona with down-sampling methods
  (primarily boxcar-averaging and Gaussian-function smoothing) and
  that obtained with high-order PFSS solution using no down-sampling
  or smoothing applied to the input Br map, for the target area of
  the session. The advantages and disadvantages of different smoothing
  methods will be evaluated and discussed. <P />This work is partially
  supported by NASA HSWO2R Grant 80NSSC19K0007.

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Title: Photospheric Magnetic Field Properties of Flaring
vs. Flare-quiet active regions, V: Results from HMI
Authors: Leka, KD; Barnes, G.
2018csc..confE..87L    Altcode:
  What constitutes the difference between those solar active regions
  that produce energetic events and those that do not? The answer
  no doubt lies in the state and ongoing evolution of the magnetic
  field. Extending this series of studies of the photospheric magnetic
  field as related to flare imminency, we consider daily evaluations
  of almost all HMI Active Region Patches (HARPS), including temporal
  evolution. Using the NWRA Classification Infrastructure based on
  NonParametric Discriminant Analysis, we evaluate not only the static
  characterization of the photospheric field (extending well beyond
  the SHARP parameters) but include coronal topology and time-series
  considerations, as well. Additionally, we extend the analysis beyond
  "global" parametrizations to describe sub-area sites which may play
  roles in coronal energization and event triggering. We report here on
  those parametrizations which best distinguish imminent flaring from
  imminent quiet sunspot groups.

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Title: Predicting the Where and the How Big of Solar Flares
Authors: Leka, K. D.; Barnes, G.; Gilchrist, S.; Wheatland, M.
2017shin.confE..87L    Altcode:
  The approach to predicting solar flares generally characterizes global
  properties of a solar active region, for example the total magnetic flux
  or the total length of a sheared magnetic neutral line, and compares new
  data (from which to make a prediction) to similar observations of active
  regions and their associated propensity for flare production. We take
  here a different tack, examining solar active regions in the context
  of their energy storage capacity. Specifically, we characterize not
  the region as a whole, but summarize the energy-release prospects
  of different sub-regions within, using a sub-area analysis of the
  photospheric boundary, the CFIT non-linear force-free extrapolation
  code, and the Minimum Current Corona model. We present here early
  results from this approach whose objective is to understand the
  different pathways available for regions to release stored energy, thus
  eventually providing better estimates of the 'where' (what sub-areas
  are storing how much energy) and the 'how big' (how much energy is
  stored, and how much is available for release) of solar flares.

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Title: VizieR Online Data Catalog: Statistical analysis of solar
    active regions (Barnes+, 2014)
Authors: Barnes, G.; Birch, A. C.; Leka, K. D.; Braun, D. C.
2017yCat..17860019B    Altcode:
  In brief, samples from two populations are considered: "pre-emergence"
  targets (PE) that track a 32°x32° patch of the Sun prior to the
  emergence of a NOAA-numbered AR and "non-emergence" targets (NE)
  selected for lack of emergence and lack of strong fields in the
  central portions of the tracked patch. The PE sample size comprises
  107 targets obtained between 2001 and 2007, matched to 107 NE targets
  drawn from an initially larger sample and selected further to match
  the PE distributions in time and observing location on the disk. <P
  />(2 data files).

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Title: Evaluating (and Improving) Estimates of the Solar Radial
    Magnetic Field Component from Line-of-Sight Magnetograms
Authors: Leka, K. D.; Barnes, G.; Wagner, E. L.
2017SoPh..292...36L    Altcode: 2017arXiv170104836L
  Although for many solar physics problems the desirable or meaningful
  boundary is the radial component of the magnetic field B<SUB>r</SUB>,
  the most readily available measurement is the component of the magnetic
  field along the line of sight to the observer, B<SUB>los</SUB>. As
  this component is only equal to the radial component where the
  viewing angle is exactly zero, some approximation is required to
  estimate B<SUB>r</SUB> at all other observed locations. In this
  study, a common approximation known as the "μ -correction", which
  assumes all photospheric field to be radial, is compared to a method
  that invokes computing a potential field that matches the observed
  B<SUB>los</SUB>, from which the potential field radial component,
  B<SUB>r</SUB><SUP>pot</SUP> is recovered. We demonstrate that in
  regions that are truly dominated by a radially oriented field at the
  resolution of the data employed, the μ -correction performs acceptably
  if not better than the potential-field approach. However, it is also
  shown that for any solar structure that includes horizontal fields,
  i.e. active regions, the potential-field method better recovers both the
  strength of the radial field and the location of magnetic neutral line.

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Title: A Fixed-point Scheme for the Numerical Construction of
    Magnetohydrostatic Atmospheres in Three Dimensions
Authors: Gilchrist, S. A.; Braun, D. C.; Barnes, G.
2016SoPh..291.3583G    Altcode: 2016arXiv160900733G; 2016SoPh..tmp..182G
  Magnetohydrostatic models of the solar atmosphere are often based on
  idealized analytic solutions because the underlying equations are too
  difficult to solve in full generality. Numerical approaches, too, are
  often limited in scope and have tended to focus on the two-dimensional
  problem. In this article we develop a numerical method for solving the
  nonlinear magnetohydrostatic equations in three dimensions. Our method
  is a fixed-point iteration scheme that extends the method of Grad and
  Rubin (Proc. 2nd Int. Conf. on Peaceful Uses of Atomic Energy31, 190,
  1958) to include a finite gravity force. We apply the method to a test
  case to demonstrate the method in general and our implementation in
  code in particular.

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Title: A Comparison of Flare Forecasting Methods. I. Results from
    the “All-Clear” Workshop
Authors: Barnes, G.; Leka, K. D.; Schrijver, C. J.; Colak, T.;
   Qahwaji, R.; Ashamari, O. W.; Yuan, Y.; Zhang, J.; McAteer, R. T. J.;
   Bloomfield, D. S.; Higgins, P. A.; Gallagher, P. T.; Falconer, D. A.;
   Georgoulis, M. K.; Wheatland, M. S.; Balch, C.; Dunn, T.; Wagner, E. L.
2016ApJ...829...89B    Altcode: 2016arXiv160806319B
  Solar flares produce radiation that can have an almost immediate effect
  on the near-Earth environment, making it crucial to forecast flares
  in order to mitigate their negative effects. The number of published
  approaches to flare forecasting using photospheric magnetic field
  observations has proliferated, with varying claims about how well
  each works. Because of the different analysis techniques and data
  sets used, it is essentially impossible to compare the results from
  the literature. This problem is exacerbated by the low event rates of
  large solar flares. The challenges of forecasting rare events have long
  been recognized in the meteorology community, but have yet to be fully
  acknowledged by the space weather community. During the interagency
  workshop on “all clear” forecasts held in Boulder, CO in 2009,
  the performance of a number of existing algorithms was compared
  on common data sets, specifically line-of-sight magnetic field and
  continuum intensity images from the Michelson Doppler Imager, with
  consistent definitions of what constitutes an event. We demonstrate
  the importance of making such systematic comparisons, and of using
  standard verification statistics to determine what constitutes a good
  prediction scheme. When a comparison was made in this fashion, no one
  method clearly outperformed all others, which may in part be due to the
  strong correlations among the parameters used by different methods to
  characterize an active region. For M-class flares and above, the set
  of methods tends toward a weakly positive skill score (as measured
  with several distinct metrics), with no participating method proving
  substantially better than climatological forecasts.

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Title: Fractionated (Martian) Noble Gases — EFA, Experiments
    and Meteorites
Authors: Schwenzer, S. P.; Barnes, G.; Bridges, J. C.; Bullock,
   M. A.; Chavez, C. L.; Filiberto, J.; Herrmann, S.; Hicks, L. J.;
   Kelley, S. P.; Miller, M. A.; Moore, J. M.; Ott, U.; Smith, H. D.;
   Steer, E. D.; Swindle, T. D.; Treiman, A. H.
2016LPICo1921.6099S    Altcode:
  Noble gases are tracers for physical processes, including adsorption,
  dissolution and secondary mineral formation. We examine the Martian
  fractionated atmosphere through literature, terrestrial analogs and
  experiments.

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Title: Lessening the Effects of Projection for Line-of-Sight Magnetic
    Field Data.
Authors: Leka, K. D.; Barnes, G.; Wagner, E. L.
2016shin.confE.147L    Altcode:
  A method for treating line-of-sight magnetic field data (B_los)
  is developed for the goal of reconstructing the radially-directed
  component (B_r) of the solar photospheric magnetic field. The latter
  is generally the desired quantity for use as a boundary for modeling
  efforts and observational interpretation of the surface field, but the
  two are only equivalent where the viewing angle is exactly zero. A
  common approximation known as the 'μ-correction', which assumes
  all photospheric field to be radial, is compared to a method which
  invokes a potential field constructed to match the observed B_los
  (Alissandrakis 1981; Sakurai 1982), from which the potential field
  radial field component is recovered.

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Title: The Influence of Spatial resolution on Nonlinear Force-free
    Modeling
Authors: DeRosa, M. L.; Wheatland, M. S.; Leka, K. D.; Barnes, G.;
   Amari, T.; Canou, A.; Gilchrist, S. A.; Thalmann, J. K.; Valori,
   G.; Wiegelmann, T.; Schrijver, C. J.; Malanushenko, A.; Sun, X.;
   Régnier, S.
2015ApJ...811..107D    Altcode: 2015arXiv150805455D
  The nonlinear force-free field (NLFFF) model is often used to
  describe the solar coronal magnetic field, however a series of
  earlier studies revealed difficulties in the numerical solution of the
  model in application to photospheric boundary data. We investigate
  the sensitivity of the modeling to the spatial resolution of the
  boundary data, by applying multiple codes that numerically solve the
  NLFFF model to a sequence of vector magnetogram data at different
  resolutions, prepared from a single Hinode/Solar Optical Telescope
  Spectro-Polarimeter scan of NOAA Active Region 10978 on 2007 December
  13. We analyze the resulting energies and relative magnetic helicities,
  employ a Helmholtz decomposition to characterize divergence errors, and
  quantify changes made by the codes to the vector magnetogram boundary
  data in order to be compatible with the force-free model. This study
  shows that NLFFF modeling results depend quantitatively on the spatial
  resolution of the input boundary data, and that using more highly
  resolved boundary data yields more self-consistent results. The
  free energies of the resulting solutions generally trend higher
  with increasing resolution, while relative magnetic helicity values
  vary significantly between resolutions for all methods. All methods
  require changing the horizontal components, and for some methods also
  the vertical components, of the vector magnetogram boundary field in
  excess of nominal uncertainties in the data. The solutions produced
  by the various methods are significantly different at each resolution
  level. We continue to recommend verifying agreement between the modeled
  field lines and corresponding coronal loop images before any NLFFF
  model is used in a scientific setting.

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Title: The Helioseismic and Magnetic Imager (HMI) Vector Magnetic
Field Pipeline: Optimization of the Spectral Line Inversion Code
Authors: Centeno, R.; Schou, J.; Hayashi, K.; Norton, A.; Hoeksema,
   J. T.; Liu, Y.; Leka, K. D.; Barnes, G.
2014SoPh..289.3531C    Altcode: 2014SoPh..tmp...44C; 2014arXiv1403.3677C
  The Very Fast Inversion of the Stokes Vector (VFISV) is a
  Milne-Eddington spectral line inversion code used to determine the
  magnetic and thermodynamic parameters of the solar photosphere from
  observations of the Stokes vector in the 6173 Å Fe I line by the
  Helioseismic and Magnetic Imager (HMI) onboard the Solar Dynamics
  Observatory (SDO). We report on the modifications made to the original
  VFISV inversion code in order to optimize its operation within
  the HMI data pipeline and provide the smoothest solution in active
  regions. The changes either sped up the computation or reduced the
  frequency with which the algorithm failed to converge to a satisfactory
  solution. Additionally, coding bugs which were detected and fixed in
  the original VFISV release are reported here.

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Title: The Helioseismic and Magnetic Imager (HMI) Vector Magnetic
Field Pipeline: SHARPs - Space-Weather HMI Active Region Patches
Authors: Bobra, M. G.; Sun, X.; Hoeksema, J. T.; Turmon, M.; Liu,
   Y.; Hayashi, K.; Barnes, G.; Leka, K. D.
2014SoPh..289.3549B    Altcode: 2014arXiv1404.1879B; 2014SoPh..tmp...68B
  A new data product from the Helioseismic and Magnetic Imager (HMI)
  onboard the Solar Dynamics Observatory (SDO) called Space-weather
  HMI Active Region Patches (SHARPs) is now available. SDO/HMI is the
  first space-based instrument to map the full-disk photospheric vector
  magnetic field with high cadence and continuity. The SHARP data series
  provide maps in patches that encompass automatically tracked magnetic
  concentrations for their entire lifetime; map quantities include the
  photospheric vector magnetic field and its uncertainty, along with
  Doppler velocity, continuum intensity, and line-of-sight magnetic
  field. Furthermore, keywords in the SHARP data series provide several
  parameters that concisely characterize the magnetic-field distribution
  and its deviation from a potential-field configuration. These indices
  may be useful for active-region event forecasting and for identifying
  regions of interest. The indices are calculated per patch and are
  available on a twelve-minute cadence. Quick-look data are available
  within approximately three hours of observation; definitive science
  products are produced approximately five weeks later. SHARP data are
  available at jsoc.stanford.edu and maps are available in either of
  two different coordinate systems. This article describes the SHARP
  data products and presents examples of SHARP data and parameters.

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Title: Studies on Forecasting Solar Flares
Authors: Leka, K. D.; Barnes, G.; Braun, D. C.; Wagner, E. L.
2014shin.confE.171L    Altcode:
  Forecasting solar flares is a challenge from various scientific
  perspectives; major solar flares are inherently rare events, and all
  observations available with which to evaluate the flare-readiness of the
  Sun are remote, with inferences about the physical state rather than
  direct measurements. We report on efforts to improve forecasts, using
  data from the Helioseismic and Magnetic Imager on the Solar Dynamics
  Observatory using magnetic field and helioseismic parametrization,
  magnetic charge topology and Discriminant Analysis. We report on
  preliminary results of the performance, including the temporal
  variations of the parametrizations. <P />This work is supported by
  NASA contract NNH12CG10C and NOAA Contract WC-133R-13-CN-0079

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Title: Helioseismology of Pre-emerging Active
    Regions. III. Statistical Analysis
Authors: Barnes, G.; Birch, A. C.; Leka, K. D.; Braun, D. C.
2014ApJ...786...19B    Altcode: 2013arXiv1307.1938B
  The subsurface properties of active regions (ARs) prior to their
  appearance at the solar surface may shed light on the process of
  AR formation. Helioseismic holography has been applied to samples
  taken from two populations of regions on the Sun (pre-emergence and
  without emergence), each sample having over 100 members, that were
  selected to minimize systematic bias, as described in Paper I. Paper
  II showed that there are statistically significant signatures in
  the average helioseismic properties that precede the formation of
  an AR. This paper describes a more detailed analysis of the samples
  of pre-emergence regions and regions without emergence based on
  discriminant analysis. The property that is best able to distinguish
  the populations is found to be the surface magnetic field, even
  a day before the emergence time. However, after accounting for the
  correlations between the surface field and the quantities derived from
  helioseismology, there is still evidence of a helioseismic precursor
  to AR emergence that is present for at least a day prior to emergence,
  although the analysis presented cannot definitively determine the
  subsurface properties prior to emergence due to the small sample sizes.

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Title: AMBIG: Automated Ambiguity-Resolution Code
Authors: Leka, K. D.; Barnes, G.; Crouch, A.
2014ascl.soft04007L    Altcode:
  AMBIG is a fast, automated algorithm for resolving the 180°
  ambiguity in vector magnetic field data, including those data from
  Hinode/Spectropolarimeter. The Fortran-based code is loosely based
  on the Minimum Energy Algorithm, and is distributed to provide
  ambiguity-resolved data for the general user community.

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Title: The Second NWRA Flare-Forecasting Comparison Workshop:
    Methods Compared and Methodology
Authors: Leka, K. D.; Barnes, G.; Flare Forecasting Comparison Group
2013SPD....44...81L    Altcode:
  The Second NWRA Workshop to compare methods of solar flare forecasting
  was held 2-4 April 2013 in Boulder, CO. This is a follow-on to the
  First NWRA Workshop on Flare Forecasting Comparison, also known as the
  “All-Clear Forecasting Workshop”, held in 2009 jointly with NASA/SRAG
  and NOAA/SWPC. For this most recent workshop, many researchers who are
  active in the field participated, and diverse methods were represented
  in terms of both the characterization of the Sun and the statistical
  approaches used to create a forecast. A standard dataset was created
  for this investigation, using data from the Solar Dynamics Observatory/
  Helioseismic and Magnetic Imager (SDO/HMI) vector magnetic field HARP
  series. For each HARP on each day, 6 hours of data were used, allowing
  for nominal time-series analysis to be included in the forecasts. We
  present here a summary of the forecasting methods that participated
  and the standardized dataset that was used. Funding for the workshop
  and the data analysis was provided by NASA/Living with a Star contract
  NNH09CE72C and NASA/Guest Investigator contract NNH12CG10C.

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Title: Solar Flare Forecasting: a "State of the Field" Report for
    Researchers
Authors: Leka, K. D.; Barnes, G.
2013SPD....44...82L    Altcode:
  It can be argued that the most stringent test of understanding a
  deterministic system is to be able to forecast an outcome based on
  observable particulars. It can also be argued that (1) solar flares may
  not be deterministic , and even if they were, our present understanding
  is nowhere close to being able to predict the time and location of
  a solar flare with any certainty. Still, solar flare prediction is a
  needed component of our national space weather infrastructure, and many
  groups around the world are investigating ways to improve forecasting
  methods, especially in light of new observational data available,
  such as from the Solar Dynamics Observatory. We present a (very) brief
  report of the "state of the field", summarizing insights gained from
  workshops (held in 2009 and 2013) aimed at head-to-head comparisons
  of flare forecasting methods in specific contexts. In summary,
  today's methods combine sophisticated data analysis with statistical
  or computer-learning algorithms generally result in probabilistic
  forecasts. It is unclear whether any of the presently developed
  methods clearly outperforms the others, as measured using standard
  skill scores applied to the careful comparisons that participating
  researchers engaged in at the workshops. However, it is also clear that
  new insights into flare triggering mechanisms, especially as afforded
  by modern analysis of high-cadence, high-quality data such as from
  SDO, have yet to be fully exploited. Funding for the workshops and
  subsequent analysis was provided by NASA/Living with a Star contract
  NNH09CE72C and NASA/Guest Investigator contract NNH12CG10C.

---------------------------------------------------------
Title: A Search for Pre-Emergence Helioseismic Signatures of Active
Regions: Study Design and some Average Results
Authors: Leka, K. D.; Birch, A.; Barnes, G.; Braun, D.; Javornik,
   B.; Gonzalez-Hernandez, I.; Dunn, T.
2013SPD....44...91L    Altcode:
  Helioseismology can be an important tool for understanding the
  formation of active regions. This poster describes the design of a
  recently completed study, testing whether pre-appearance signatures
  of solar magnetic active regions were detectable using various tools
  of local helioseismology. We provide details of the data selection
  and preparation of samples, each containing over 100 members, of
  two populations: regions on the Sun which produced a numbered NOAA
  active region, and a "control" sample of areas which did not. The
  seismology is performed on data from the GONG network; accompanying
  magnetic data from the Michelson Doppler Imager aboard SoHO are used
  for co-temporal analysis of the surface magnetic field. Samples are
  drawn from 2001--2007, and each target is analyzed for 27.7hr prior
  to an objectively determined time of emergence. We describe known
  sources of bias and the approaches used to mitigate them. Examining the
  average ensemble differences between the two populations, we describe
  significant and surprising differences between our samples in both
  quantities determined from helioseismology and from surface magnetic
  fields. This work was supported by NASA contract NNH07CD25C.

---------------------------------------------------------
Title: Making global map of the solar surface B<SUB>r</SUB> from
    the HMI vector magnetic field observations
Authors: Hayashi, K.; Liu, Y.; Sun, X.; Hoeksema, J. T.; Centeno,
   R.; Barnes, G.; Leka, K. D.
2013JPhCS.440a2036H    Altcode:
  The Helioseismic Magnetic Imager (HMI) has made full-disk vector
  magnetic field measurements of the Sun with cadence of 12 minutes. The
  three-component solar surface magnetic field vector data are from
  the HMI observations with the data process pipeline modules, VFISV
  (Very Fast Inversion of the Stokes Vector, Borrero et al., 2011)
  for Milne-Eddington inversion and the minimum-energy disambiguation
  algorithm (Metcalf 1994, Leka et al, 2009). The models of the global
  corona and solar wind, such as the PFSS (potential-field source-surface)
  model and the MHD simulations, often use the maps of solar surface
  magnetic field, especially the radial component (B<SUB>r</SUB>) as the
  boundary condition. The HMI observation can provide new B<SUB>r</SUB>
  data for these model. Because of weak magnetic signals at the quiet
  regions of the Sun, the limb darkening, and geometric effects near solar
  poles, we need to apply an assumption to make a whole-surface map. In
  this paper, we tested two assumptions for determining B<SUB>r</SUB>
  at weak-field regions. The coronal structures calculated by the PFSS
  model with the vector-based B<SUB>r</SUB> are compared with those with
  the magnetogram-based B<SUB>r</SUB> and the corona observed by the
  SDO/AIA (Atmospheric Imaging Assembly). In the tested period, CR 2098,
  the vector-based B<SUB>r</SUB> map gives better agreements than the
  line-of-sight magnetogram data, though we need further investigation
  for evaluation.

---------------------------------------------------------
Title: Helioseismology of Pre-emerging Active Regions. II. Average
    Emergence Properties
Authors: Birch, A. C.; Braun, D. C.; Leka, K. D.; Barnes, G.;
   Javornik, B.
2013ApJ...762..131B    Altcode: 2013arXiv1303.1391B
  We report on average subsurface properties of pre-emerging active
  regions as compared to areas where no active region emergence was
  detected. Helioseismic holography is applied to samples of the two
  populations (pre-emergence and without emergence), each sample having
  over 100 members, which were selected to minimize systematic bias,
  as described in Leka et al. We find that there are statistically
  significant signatures (i.e., difference in the means of more than a few
  standard errors) in the average subsurface flows and the apparent wave
  speed that precede the formation of an active region. The measurements
  here rule out spatially extended flows of more than about 15 m
  s<SUP>-1</SUP> in the top 20 Mm below the photosphere over the course
  of the day preceding the start of visible emergence. These measurements
  place strong constraints on models of active region formation.

---------------------------------------------------------
Title: Helioseismology of Pre-emerging Active Regions. I. Overview,
    Data, and Target Selection Criteria
Authors: Leka, K. D.; Barnes, G.; Birch, A. C.; Gonzalez-Hernandez,
   I.; Dunn, T.; Javornik, B.; Braun, D. C.
2013ApJ...762..130L    Altcode: 2013arXiv1303.1433L
  This first paper in a series describes the design of a study testing
  whether pre-appearance signatures of solar magnetic active regions
  were detectable using various tools of local helioseismology. The
  ultimate goal is to understand flux-emergence mechanisms by setting
  observational constraints on pre-appearance subsurface changes, for
  comparison with results from simulation efforts. This first paper
  provides details of the data selection and preparation of the samples,
  each containing over 100 members, of two populations: regions on
  the Sun that produced a numbered NOAA active region, and a "control"
  sample of areas that did not. The seismology is performed on data from
  the GONG network; accompanying magnetic data from SOHO/MDI are used
  for co-temporal analysis of the surface magnetic field. Samples are
  drawn from 2001-2007, and each target is analyzed for 27.7 hr prior
  to an objectively determined time of emergence. The results of two
  analysis approaches are published separately: one based on averages of
  the seismology- and magnetic-derived signals over the samples, another
  based on Discriminant Analysis of these signals, for a statistical test
  of detectable differences between the two populations. We include
  here descriptions of a new potential-field calculation approach
  and the algorithm for matching sample distributions over multiple
  variables. We describe known sources of bias and the approaches used
  to mitigate them. We also describe unexpected bias sources uncovered
  during the course of the study and include a discussion of refinements
  that should be included in future work on this topic.

---------------------------------------------------------
Title: A First Look at Magnetic Field Data Products from SDO/HMI
Authors: Liu, Y.; Scherrer, P. H.; Hoeksema, J. T.; Schou, J.; Bai,
   T.; Beck, J. G.; Bobra, M.; Bogart, R. S.; Bush, R. I.; Couvidat,
   S.; Hayashi, K.; Kosovichev, A. G.; Larson, T. P.; Rabello-Soares,
   C.; Sun, X.; Wachter, R.; Zhao, J.; Zhao, X. P.; Duvall, T. L., Jr.;
   DeRosa, M. L.; Schrijver, C. J.; Title, A. M.; Centeno, R.; Tomczyk,
   S.; Borrero, J. M.; Norton, A. A.; Barnes, G.; Crouch, A. D.; Leka,
   K. D.; Abbett, W. P.; Fisher, G. H.; Welsch, B. T.; Muglach, K.;
   Schuck, P. W.; Wiegelmann, T.; Turmon, M.; Linker, J. A.; Mikić,
   Z.; Riley, P.; Wu, S. T.
2012ASPC..455..337L    Altcode:
  The Helioseismic and Magnetic Imager (HMI; Scherrer &amp; Schou 2011)
  is one of the three instruments aboard the Solar Dynamics Observatory
  (SDO) that was launched on February 11, 2010 from Cape Canaveral,
  Florida. The instrument began to acquire science data on March 24. The
  regular operations started on May 1. HMI measures the Doppler velocity
  and line-of-sight magnetic field in the photosphere at a cadence of
  45 seconds, and the vector magnetic field at a 135-second cadence,
  with a 4096× 4096 pixels full disk coverage. The vector magnetic
  field data is usually averaged over 720 seconds to suppress the p-modes
  and increase the signal-to-noise ratio. The spatial sampling is about
  0".5 per pixel. HMI observes the Fe i 6173 Å absorption line, which
  has a Landé factor of 2.5. These data are further used to produce
  higher level data products through the pipeline at the HMI-AIA Joint
  Science Operations Center (JSOC) - Science Data Processing (Scherrer et
  al. 2011) at Stanford University. In this paper, we briefly describe the
  data products, and demonstrate the performance of the HMI instrument. We
  conclude that the HMI is working extremely well.

---------------------------------------------------------
Title: Modeling and Interpreting the Effects of Spatial Resolution
    on Solar Magnetic Field Maps
Authors: Leka, K. D.; Barnes, G.
2012SoPh..277...89L    Altcode: 2011arXiv1106.5024L
  Different methods for simulating the effects of spatial resolution on
  magnetic field maps are compared, including those commonly used for
  inter-instrument comparisons. The investigation first uses synthetic
  data, and the results are confirmed with Hinode/SpectroPolarimeter
  data. Four methods are examined, one which manipulates the Stokes
  spectra to simulate spatial-resolution degradation, and three
  "post-facto" methods where the magnetic field maps are manipulated
  directly. Throughout, statistical comparisons of the degraded maps
  with the originals serve to quantify the outcomes. Overall, we find
  that areas with inferred magnetic fill fractions close to unity may
  be insensitive to optical spatial resolution; areas of sub-unity fill
  fractions are very sensitive. Trends with worsening spatial resolution
  can include increased average field strength, lower total flux, and
  a field vector oriented closer to the line of sight. Further-derived
  quantities such as vertical current density show variations even in
  areas of high average magnetic fill fraction. In short, unresolved maps
  fail to represent the distribution of the underlying unresolved fields,
  and the "post-facto" methods generally do not reproduce the effects of
  a smaller telescope aperture. It is argued that selecting a method in
  order to reconcile disparate spatial resolution effects should depend
  on the goal, as one method may better preserve the field distribution,
  while another can reproduce spatial resolution degradation. The results
  presented should help direct future inter-instrument comparisons.

---------------------------------------------------------
Title: Spectropolarimetry in the Sodium 589.6nm D1 line: Evaluating
    the Resulting Chromospheric (?) Vector Field Maps.
Authors: Leka, K. D.; Barnes, G.; Stockwell, R. G.; Wagner, E. L.;
   Uitenbroek, H.; Derouich, M.
2012decs.confE..79L    Altcode:
  Pioneering work by T. R. Metcalf almost two decades ago pointed to
  the Na 589.6nm D1 line as a contender for providing chromospheric
  vector magnetic field measurements (using the Zeeman effect). We
  report here on a systematic examination of what can be expected from
  Sodium 589.6nm spectropolarimetry, with respects to polarization-signal
  amplitudes and retrieval, and the implementation of the inversion for
  this line based on the Jeffries, Lites &amp; Skumanich Weak-Field
  Approximation algorithm. The analysis is performed using both
  synthetic data and observations from the Imaging Vector Magnetograph,
  for which a large dataset of Sodium 589.6nm vector spectropolarimetry
  exists. The synthetic data are based on a 3-D field extrapolated from
  photospheric vector magnetograms of two active regions, four distinct
  model atmospheres coupled with NLTE synthesis of the emergent NaI
  D1 Stokes polarization spectra, computed for a variety of viewing
  angles. In this manner, a broad representation of active-region
  features, field strengths and observing angles are tested using “hare
  &amp; hound” approaches, including evaluating algorithm performance in
  the presence of noise and instrumental effects. We compare retrieval
  algorithms for the very weak (as expected) polarization signals, and
  evaluate the retrieved vector magnetic field at a range of inferred
  heights. Finally, we provide an example from the IVM and discuss the
  prospects for obtaining and interpreting chromospheric vector magnetic
  field maps. Support for this work comes from NASA NAG5-12466, NASA
  NNH09CE60C, AFOSR F49620-03-C-0019, NSF/NSWP ATM-0519107, NSF/SHINE
  ATM-0454610, and NSF CRG ATM-0551055.

---------------------------------------------------------
Title: A Comparison of Methods for Manipulating SpectroPolarimetric
    and Magnetic Field Data for Heliospheric Models, Data Comparisons,
    and Physical Interpretation
Authors: Leka, K. D.; Barnes, G.
2011shin.confE..22L    Altcode:
  Heliospheric modeling efforts often begin with boundary data, and
  those boundary data are either observed or simulated photospheric
  magnetic field maps. Oftentimes, the available boundary data just
  aren't compatible with what is needed, or what can be handled by
  subsequent code. But how well do rebinned/remapped/averaged magnetic
  maps represent the underlying field? We address this question using
  model fields, where the true field is known, but the

---------------------------------------------------------
Title: Topology of Coronal Fields from Potential Field Models
Authors: DeRosa, Marc L.; Schrijver, C. J.; Barnes, G.
2011SPD....42.1810D    Altcode: 2011BAAS..43S.1810D
  The topology of the solar coronal magnetic field has been the subject of
  much recent interest, due to its apparent importance in determining (for
  example) the sources of the solar wind, the evolution of coronal hole
  boundaries, and whether the configurations of coronae overlying active
  regions are unstable and thus possibly eruption-prone. We identify
  the topological skeleton (null points, spline lines, separators, and
  separatrix surfaces) for a selection of dates of interest from the
  database of potential-field source-surface models available through
  the “PFSS” SolarSoft package. Several features of interest have been
  identified by recent studies (e.g., Antiochos et al. 2007, Parnell et
  al. 2010, Titov et al. 2011), including exceedingly narrow channels of
  open field or separators associated with inferred reconnection sites. We
  find that these features of interest occur frequently in the topologies
  of even potential-field models of the magnetic corona. The actual solar
  corona is of course likely to involve even more complex topologies,
  especially as its dynamics and evolution are taken into account.

---------------------------------------------------------
Title: Subsurface Vorticity of Flaring versus Flare-Quiet Active
    Regions
Authors: Komm, R.; Ferguson, R.; Hill, F.; Barnes, G.; Leka, K. D.
2011SoPh..268..389K    Altcode: 2010SoPh..tmp...78K
  We apply discriminant analysis to 1023 active regions and their
  subsurface-flow parameters, such as vorticity and kinetic helicity
  density, with the goal of distinguishing between flaring and non-flaring
  active regions. We derive synoptic subsurface flows by analyzing GONG
  high-resolution Doppler data with ring-diagram analysis. We include
  magnetic-flux values in the discriminant analysis derived from NSO
  Kitt Peak and SOLIS synoptic maps binned to the same spatial scale
  as the helioseismic analysis. For each active region, we determine
  the flare information from GOES and include all flares within 60°
  central meridian distance to match the coverage of the ring-diagram
  analysis. The subsurface-flow characteristics improve the ability to
  distinguish between flaring and non-flaring active regions. For the C-
  and M-class flare category, the most important subsurface parameter
  is the so-called structure vorticity, which estimates the horizontal
  gradient of the horizontal-vorticity components. The no-event skill
  score, which measures the improvement over predicting that no events
  occur, reaches 0.48 for C-class flares and 0.32 for M-class flares, when
  the structure vorticity at three depths combined with total magnetic
  flux are used. The contributions come mainly from shallow layers within
  about 2 Mm of the surface and layers deeper than about 7 Mm.

---------------------------------------------------------
Title: Coronal Loop Evolution and Inferred Coronal Magnetic Energy
    in a Quiet Active Region
Authors: Lee, Jin-Yi; Barnes, G.; Leka, K.; Reeves, K. K.; Korreck,
   K. E.; Golub, L.
2010AAS...21640514L    Altcode: 2010BAAS...41R.891L
  We investigate changes in the properties of the coronal magnetic field
  in the context of different emission of coronal loops. Observations by
  the Transition Region and Coronal Explorer (TRACE), the Hinode/X-ray
  Telescope (XRT), and the SOHO/Michelson Doppler Imager (MDI), the
  X-ray and EUV light curves as well as the photospheric magnetic flux
  of NOAA active region 10963 are utilized to compare the coronal and
  photospheric magnetic fields. A Magnetic Charge Topology (MCT) model
  is used to establish potential magnetic field connectivity of the
  surface magnetic flux distribution. A Minimum Current Corona (MCC)
  model is applied to determine the coronal currents and quantify the
  energy build-up. The results of the MCC analysis are compared to the
  evolution of the coronal loop brightness, comparing areas of steady
  emission, transient emission, and temporal patterns of emission which
  imply coronal cooling.

---------------------------------------------------------
Title: Subsurface Flow Properties of Flaring versus Flare-Quiet
    Active Regions
Authors: Ferguson, R.; Komm, R.; Hill, F.; Barnes, G.; Leka, K. D.
2009ASPC..416..127F    Altcode:
  We apply discriminant analysis to 1009 active regions and their
  subsurface flow parameters, such as vorticity and kinetic helicity
  density, with the goal of distinguishing between flaring and non-flaring
  active regions. Flow and flux variables lead to better classification
  rates than a no-event prediction. The Heidke skill score, which measures
  the improvement over predicting that no events occur, increases by
  about 25% and 50% for C- and M-class flares when several subsurface
  characteristics are included compared to using a single magnetic
  flux measure.

---------------------------------------------------------
Title: Resolving the Azimuthal Ambiguity in Vector Magnetogram Data
with the Divergence-Free Condition: Application to Discrete Data
Authors: Crouch, A. D.; Barnes, G.; Leka, K. D.
2009SoPh..260..271C    Altcode: 2009arXiv0911.0711C
  We investigate how the divergence-free property of magnetic fields can
  be exploited to resolve the azimuthal ambiguity present in solar vector
  magnetogram data, by using line-of-sight and horizontal heliographic
  derivative information as approximated from discrete measurements. Using
  synthetic data we test several methods that each make different
  assumptions about how the divergence-free property can be used to
  resolve the ambiguity. We find that the most robust algorithm involves
  the minimisation of the absolute value of the divergence summed over
  the entire field of view. Away from disk centre this method requires
  the sign and magnitude of the line-of-sight derivatives of all three
  components of the magnetic field vector.

---------------------------------------------------------
Title: An Automated Ambiguity-Resolution Code for Hinode/SP Vector
    Magnetic Field Data
Authors: Leka, K. D.; Barnes, G.; Crouch, A.
2009ASPC..415..365L    Altcode:
  A fast, automated algorithm is presented for use in resolving
  the 180° ambiguity in vector magnetic field data, including
  those data from Hinode/Spectropolarimeter. The Fortran-based
  code is loosely based on the Minimum Energy Algorithm, and is
  distributed to provide ambiguity-resolved data for the general user
  community. Here we generally describe the released code (available
  at http://www.cora.nwra.com/AMBIG), examples of its performance and
  usage for Hinode/SP data.

---------------------------------------------------------
Title: Evolution of Magnetic Properties for Two Active Regions
    Observed by Hinode/XRT and TRACE
Authors: Lee, J. -Y.; Leka, K. D.; Barnes, G.; Reeves, K. K.; Korreck,
   K. E.; Golub, L.
2009ASPC..415..279L    Altcode:
  We investigate two active regions observed by the Hinode X-ray Telescope
  (XRT) and the Transition Region and Coronal Explorer (TRACE). One active
  region shows constant brightness in both XRT and TRACE observations. The
  other active region shows a brightening in the TRACE observation
  just after a decrease in X-ray brightness indicating the cooling of a
  coronal loop. The coronal magnetic topology is derived using a magnetic
  charge topology (MCT) model for these two active regions applied to
  magnetograms from the Michelson Doppler Imager (MDI) on board the Solar
  and Heliospheric Observatory (SOHO). We discuss the results of the MCT
  analysis with respect to the light curves for these two active regions.

---------------------------------------------------------
Title: Magnetic energy build-up and coronal brightness evolution
Authors: Lee, J.; Barnes, G.; Leka, K. D.; Reeves, K. K.; Korreck,
   K. E.; Golub, L.
2009AGUFMSH41B1664L    Altcode:
  We have investigated changes in the properties of the coronal magnetic
  field in the context of different emission behaviors of coronal
  loops. Using observations by the Transition Region and Coronal Explorer
  (TRACE), the Hinode/X-ray Telescope (XRT), and the SoHO/Michelson
  Doppler Imager (MDI), NOAA active region 10963 has been analyzed
  in depth as to how different coronal signatures compare to inferred
  coronal energy build-up. A Magnetic Charge Topology (MCT) model was
  used to establish potential magnetic field connectivity of the surface
  magnetic flux distribution, and a Minimum Current Corona (MCC) model was
  applied to quantify the energy build-up along separator field lines. The
  results of the MCC analysis are compared to the evolution of the coronal
  brightness, comparing areas of steady emission, very transient emission,
  and temporal patterns of emission which imply coronal cooling.

---------------------------------------------------------
Title: Nonlinear Force-Free Magnetic Field Modeling of AR 10953:
    A Critical Assessment
Authors: De Rosa, Marc L.; Schrijver, C. J.; Barnes, G.; Leka, K. D.;
   Lites, B. W.; Aschwanden, M. J.; Amari, T.; Canou, A.; McTiernan,
   J. M.; Régnier, S.; Thalmann, J. K.; Valori, G.; Wheatland, M. S.;
   Wiegelmann, T.; Cheung, M. C. M.; Conlon, P. A.; Fuhrmann, M.;
   Inhester, B.; Tadesse, T.
2009SPD....40.3102D    Altcode:
  Nonlinear force-free field (NLFFF) modeling seeks to provide accurate
  representations of the structure of the magnetic field above solar
  active regions, from which estimates of physical quantities of interest
  (e.g., free energy and helicity) can be made. However, the suite of
  NLFFF algorithms have failed to arrive at consistent solutions when
  applied to (thus far, two) cases using the highest-available-resolution
  vector magnetogram data from Hinode/SOT-SP (in the region of the
  modeling area of interest) and line-of-sight magnetograms from
  SOHO/MDI (where vector data were not available). One issue is that
  NLFFF models require consistent, force-free vector magnetic boundary
  data, and vector magnetogram data sampling the photosphere do not
  satisfy this requirement. Consequently, several problems have arisen
  that are believed to affect such modeling efforts. We use AR 10953
  to illustrate these problems, namely: (1) some of the far-reaching,
  current-carrying connections are exterior to the observational field
  of view, (2) the solution algorithms do not (yet) incorporate the
  measurement uncertainties in the vector magnetogram data, and/or (3)
  a better way is needed to account for the Lorentz forces within the
  layer between the photosphere and coronal base. In light of these
  issues, we conclude that it remains difficult to derive useful and
  significant estimates of physical quantities from NLFFF models.

---------------------------------------------------------
Title: Detecting, Selecting, And Controlling For Emerging
    ActiveRegions In The Search For Helioseismic Pre-emergence Signatures.
Authors: Leka, K. D.; Dunn, T.; Gonzalez-Hernandez, I.; Barnes, G.;
   Braun, D.; Birch, A.
2009SPD....40.0708L    Altcode:
  Helioseismology is potentially capable of predicting the emergence of
  solaractive regions. As part of a search for statistically significant
  helioseismic predictors of active region emergence, we have developed
  methods for the automatic determination of emergence times based on the
  NOAA/NGDC active region catalog and MDI/SOHO 96 minute magnetograms. We
  demonstrate the application of this method and its sister task of
  selecting an appropriate control sample. We show first results from
  a statistical study investigating the pre-emergence signatures of
  Solar Active Regions using GONG data. This work was supported by NASA
  contract NNH07CD25C.

---------------------------------------------------------
Title: A Search for Pre-Emergence Signatures of Active Regions
Authors: Birch, Aaron; Braun, D. C.; Leka, K. D.; Barnes, G.; Dunn,
   T. L.; González Hernández, I.
2009SPD....40.0402B    Altcode:
  Prediction of solar active region emergence is an important goal
  for helioseismology. As a first step towards developing prediction
  methods, we are carrying out a search for helioseismic pre-emergence
  signatures. Using GONG data, we have applied helioseismic holography
  to about 150 pre-emergence active regions and a control sample of 450
  quiet-Sun regions. We will show preliminary results of this study. <P
  />This work was supported by NASA contract NNH07CD25C

---------------------------------------------------------
Title: Subsurface Flow Properties of Flaring Versus Flare-quiet
    Active Regions
Authors: Ferguson, Ryan M.; Komm, R.; Hill, F.; Barnes, G.; Leka, K. D.
2009SPD....40.1908F    Altcode:
  Previous studies have shown that the flare activity of active regions is
  intrinsically linked with the vorticity of subsurface flows on temporal
  and spatial scales comparable to the size and lifetime of active
  regions. We begin to address the question whether the measured vorticity
  of subsurface flows associated with active regions can help to improve
  flare forecasting. For this purpose, we apply statistical tests based
  on discriminant analysis to several subsurface flow parameters with the
  goal to differentiate between flaring and non-flaring active regions. <P
  />We will present the latest results. This work is carried out through
  the National Solar Observatory Research Experiences for Undergraduate
  (REU) site program, which is co-funded by the Department of Defense
  in partnership with the National Science Foundation REU Program.

---------------------------------------------------------
Title: Resolving the Azimuthal Ambiguity in Vector Magnetogram Data
    with the Divergence-Free Condition
Authors: Crouch, Ashley D.; Leka, K.; Barnes, G.
2009SPD....40.0915C    Altcode:
  We demonstrate how the divergence-free property of magnetic fields can
  be exploited to resolve the azimuthal ambiguity that is present in
  solar vector magnetogram data by using line-of-sight and horizontal
  heliographic derivative information. Using synthetic data at two
  heights we objectively test several methods that each make a different
  assumption about how the divergence-free property can be used to resolve
  the ambiguity. We investigate how the different approaches respond to
  various effects, including the presence of noise and limited spatial
  resolution. This work was supported by funding from NASA under contracts
  NNH05CC49C/NNH05CC75C and NNH09CE60C.

---------------------------------------------------------
Title: Magnetic Topology and Coronal Brightness Evolution: A Case
    Study
Authors: Lee, Jin-Yi; Barnes, G.; Leka, K.; Reeves, K. K.; Korreck,
   K. E.; Golub, L.
2009SPD....40.1209L    Altcode:
  We have applied a Magnetic Charge Topology model to investigate
  what changes in the properties of the magnetic field are responsible
  for different coronal emission behavior of the coronal loops in two
  different active regions. Observations from the X-ray Telescope (XRT)
  on board Hinode and the Transition Region and Coronal Expolorer (TRACE)
  were used, along with time-series of magnetograms for 24 hours from
  the Michelson Doppler Imager (MDI) on board the Solar and Heliospheric
  Observatory (SOHO). The magnetic connectivity and separator field
  lines were established by potential field extrapolation of the observed
  surface magnetic flux distribution. We present the evolution for the
  two active regions in terms of the changes in both the connections and
  in the separator flux, the latter indicative of locations of possible
  energy deposit or release.

---------------------------------------------------------
Title: UVNS: An UVvis-NIR Spectrometer for Mars airglow.
Authors: McConnell, J. C.; Barnes, G.; McDade, I.; Solheim, B.;
   Llewellyn, T.; Bourassa, A.; Daerden, F.; Friberg, D.; Blaxley, S.;
   Marchand, P.; Proulx, P.; Donovan, E.; Sioris, C.; McLinden, C.;
   Siskind, D.; Stevens, M.; Murtagh, D.; Smith, K.; Kabin, K.
2009AGUSM.P23A..01M    Altcode:
  Airglow from a planetary atmosphere can yield important information
  on composition and dynamics. In this poster we examine the scientific
  return for the Mars Science Orbiter goals using a set of compact light
  instruments with a proven heritage (OSIRIS, SOIR, and SHOW) which span
  the UV-vis-NIR-SWIR part of the spectrum measuring scattered light
  and airglow from the limb and also stellar and solar occultation. A
  nadir viewing option is also a possibility for the UV spectrometer. The
  prime instruments consist of (a) a NIR- tomographic Ox imager (NTOI)
  (provenance OSIRIS) and (b) a high resolution IR spectrometer provenance
  SOIR) operating in solar and stellar occultation modes. By imaging the
  O2(1Δ) with the NTOI in the vertical it should be possible to derive
  a 2D structure for ozone during the daytime and O at night, providing
  chemical structure in the 50-80 km height range. The observed structure,
  analysed using 3D chemistry climate models, will also provide much
  needed information on dynamics and possibly the role of gravity
  waves and thermal tides. The HRIRS/SOIR occultation instrument,
  with a sensitivity of 2 ppbv at 3.3 microns will provide a unique
  opportunity to detect methane and measure any spatial variability. But
  other species such as CO should be detectable. A third instrument
  (c) uses the spatial heterodyne method of the SHOW instrument and it
  should be possible to measure water vapour and SO2 and perhaps tune the
  instrument for other species. (d) The UV-Vis spectrometer (UVS) would
  be based on the OSIRIS spectrometer but tuned for 200-600 nm to measure
  NO airglow and aurorae ∼ 200 nm, Herzberg II bands, ozone column
  in the Herzberg continuum at ∼ 250 nm with nadir viewing. Rayleigh
  scattering would provide temperature and pressure. Thus measurements
  of ozone column and water vapour will continue the climatology of these
  species initiated by MAWD on the Viking orbiters, TES on MGS and PFS on
  Mars Express. The unambiguous detection of methane and its distribution
  would be a major achievement and contribute to the question of its
  source. The UVNS will also measure aerosol (dust, water ice, and CO2
  ice) optical depth and with the inclusion of infrared channels [SOIR]
  will provide improved information on the size distribution (Bourassa et
  al., 2008). A secondary objective would be to use the airglow data that
  would be observed to extend the MAVEN science mission and characterise
  the interaction of the solar wind with the Martian upper atmosphere
  by means of detailed airglow measurements.

---------------------------------------------------------
Title: Effects of Partitioning and Extrapolation on the Connectivity
    of Potential Magnetic Fields
Authors: Longcope, D. W.; Barnes, G.; Beveridge, C.
2009ApJ...693...97L    Altcode: 2008arXiv0811.1241L
  Coronal magnetic field may be characterized by how its field
  lines interconnect regions of opposing photospheric flux—its
  connectivity. Connectivity can be quantified as the net flux connecting
  pairs of opposing regions, once such regions are identified. One
  existing algorithm will partition a typical active region into a
  number of unipolar regions ranging from a few dozen to a few hundred,
  depending on algorithmic parameters. This work explores how the
  properties of the partitions depend on some algorithmic parameters,
  and how connectivity depends on the coarseness of partitioning for
  one particular active region magnetogram. We find the number of
  connections among them scales with the number of regions even as
  the number of possible connections scales with its square. There
  are several methods of generating a coronal field, even a potential
  field. The field may be computed inside conducting boundaries or over
  an infinite half-space. For computation of connectivity, the unipolar
  regions may be replaced by point sources or the exact magnetogram may
  be used as a lower boundary condition. Our investigation shows that the
  connectivities from these various fields differ only slightly—no more
  than 15%. The greatest difference is between fields within conducting
  walls and those in the half-space. Their connectivities grow more
  different as finer partitioning creates more source regions. This also
  gives a quantitative means of establishing how far away conducting
  boundaries must be placed in order not to significantly affect
  the extrapolation. For identical outer boundaries, the use of point
  sources instead of the exact magnetogram makes a smaller difference in
  connectivity: typically 6% independent of the number of source regions.

---------------------------------------------------------
Title: Nonlinear Force-Free Magnetic Field Modeling of the Solar
Corona: A Critical Assessment
Authors: De Rosa, M. L.; Schrijver, C. J.; Barnes, G.; Leka, K. D.;
   Lites, B. W.; Aschwanden, M. J.; McTiernan, J. M.; Régnier, S.;
   Thalmann, J.; Valori, G.; Wheatland, M. S.; Wiegelmann, T.; Cheung,
   M.; Conlon, P. A.; Fuhrmann, M.; Inhester, B.; Tadesse, T.
2008AGUFMSH41A1604D    Altcode:
  Nonlinear force-free field (NLFFF) modeling promises to provide accurate
  representations of the structure of the magnetic field above solar
  active regions, from which estimates of physical quantities of interest
  (e.g., free energy and helicity) can be made. However, the suite of
  NLFFF algorithms have so far failed to arrive at consistent solutions
  when applied to cases using the highest-available-resolution vector
  magnetogram data from Hinode/SOT-SP (in the region of the modeling
  area of interest) and line-of-sight magnetograms from SOHO/MDI (where
  vector data were not been available). It is our view that the lack of
  robust results indicates an endemic problem with the NLFFF modeling
  process, and that this process will likely continue to fail until (1)
  more of the far-reaching, current-carrying connections are within the
  observational field of view, (2) the solution algorithms incorporate
  the measurement uncertainties in the vector magnetogram data, and/or
  (3) a better way is found to account for the Lorentz forces within
  the layer between the photosphere and coronal base. In light of these
  issues, we conclude that it remains difficult to derive useful and
  significant estimates of physical quantities from NLFFF models.

---------------------------------------------------------
Title: Evaluating the Performance of Solar Flare Forecasting Methods
Authors: Barnes, G.; Leka, K. D.
2008ApJ...688L.107B    Altcode:
  The number of published approaches to solar flare forecasting using
  photospheric magnetic field observations has proliferated recently, with
  widely varying claims about how well each works. As different analysis
  techniques and data sets were used, it is essentially impossible to
  directly compare the results. A systematic comparison is presented
  here using three parameters based on the published literature that
  characterize the photospheric magnetic field itself, plus one that
  characterizes the coronal magnetic topology. Forecasts based on the
  statistical method of discriminant analysis are made for each of these
  parameters, and their ability to predict major flares is quantified
  using skill scores. Despite widely varying statements regarding their
  forecasting utility in the original studies describing these four
  parameters, there is no clear distinction in their performance here,
  thus demonstrating the importance of using standard verification
  statistics.

---------------------------------------------------------
Title: Statistical Prediction of Solar Flares Using Magnetic Field
Data: A Status Report
Authors: Leka, K.; Barnes, G.; Knoll, J.; Tessein, J. A.
2008AGUFMSA51A1535L    Altcode:
  The energy to power solar flares is undoubtedly stored in the
  concentrated magnetic field structures of solar active region
  atmospheres. Exactly how to make use of observations of the solar
  magnetic field for predicting the occurrence of solar energetic events
  is, however, a great challenge. Building upon our prior work of "daily"
  forecasts using a dataset of photospheric magnetic vector field maps,
  we examine here questions of forecasting ability in light of data
  source and the target temporal window. We will discuss the benefits and
  problems of relying upon line-of-sight magnetic field data (vs. vector
  photospheric magnetic field maps). In addition, we begin to examine
  changes in forecasting ability, as measured by standard validation
  statistics, that result from considering different forecasting windows.

---------------------------------------------------------
Title: Non-Linear Force-Free Field Modeling of a Solar Active Region
    Around the Time of a Major Flare and Coronal Mass Ejection
Authors: De Rosa, M. L.; Schrijver, C. J.; Metcalf, T. R.; Barnes,
   G.; Lites, B.; Tarbell, T.; McTiernan, J.; Valori, G.; Wiegelmann,
   T.; Wheatland, M.; Amari, T.; Aulanier, G.; Démoulin, P.; Fuhrmann,
   M.; Kusano, K.; Régnier, S.; Thalmann, J.
2008AGUSMSP31A..06D    Altcode:
  Solar flares and coronal mass ejections are associated with rapid
  changes in coronal magnetic field connectivity and are powered by
  the partial dissipation of electrical currents that run through
  the solar corona. A critical unanswered question is whether the
  currents involved are induced by the advection along the photosphere
  of pre-existing atmospheric magnetic flux, or whether these currents
  are associated with newly emergent flux. We address this problem by
  applying nonlinear force-free field (NLFFF) modeling to the highest
  resolution and quality vector-magnetographic data observed by the
  recently launched Hinode satellite on NOAA Active Region 10930 around
  the time of a powerful X3.4 flare in December 2006. We compute 14
  NLFFF models using 4 different codes having a variety of boundary
  conditions. We find that the model fields differ markedly in geometry,
  energy content, and force-freeness. We do find agreement of the best-fit
  model field with the observed coronal configuration, and argue (1)
  that strong electrical currents emerge together with magnetic flux
  preceding the flare, (2) that these currents are carried in an ensemble
  of thin strands, (3) that the global pattern of these currents and
  of field lines are compatible with a large-scale twisted flux rope
  topology, and (4) that the ~1032~erg change in energy associated with
  the coronal electrical currents suffices to power the flare and its
  associated coronal mass ejection. We discuss the relative merits of
  these models in a general critique of our present abilities to model
  the coronal magnetic field based on surface vector field measurements.

---------------------------------------------------------
Title: Nonlinear Force-free Field Modeling of a Solar Active Region
    around the Time of a Major Flare and Coronal Mass Ejection
Authors: Schrijver, C. J.; DeRosa, M. L.; Metcalf, T.; Barnes, G.;
   Lites, B.; Tarbell, T.; McTiernan, J.; Valori, G.; Wiegelmann, T.;
   Wheatland, M. S.; Amari, T.; Aulanier, G.; Démoulin, P.; Fuhrmann,
   M.; Kusano, K.; Régnier, S.; Thalmann, J. K.
2008ApJ...675.1637S    Altcode: 2007arXiv0712.0023S
  Solar flares and coronal mass ejections are associated with rapid
  changes in field connectivity and are powered by the partial dissipation
  of electrical currents in the solar atmosphere. A critical unanswered
  question is whether the currents involved are induced by the motion of
  preexisting atmospheric magnetic flux subject to surface plasma flows or
  whether these currents are associated with the emergence of flux from
  within the solar convective zone. We address this problem by applying
  state-of-the-art nonlinear force-free field (NLFFF) modeling to the
  highest resolution and quality vector-magnetographic data observed
  by the recently launched Hinode satellite on NOAA AR 10930 around
  the time of a powerful X3.4 flare. We compute 14 NLFFF models with
  four different codes and a variety of boundary conditions. We find
  that the model fields differ markedly in geometry, energy content,
  and force-freeness. We discuss the relative merits of these models in
  a general critique of present abilities to model the coronal magnetic
  field based on surface vector field measurements. For our application
  in particular, we find a fair agreement of the best-fit model field
  with the observed coronal configuration, and argue (1) that strong
  electrical currents emerge together with magnetic flux preceding the
  flare, (2) that these currents are carried in an ensemble of thin
  strands, (3) that the global pattern of these currents and of field
  lines are compatible with a large-scale twisted flux rope topology,
  and (4) that the ~10<SUP>32</SUP> erg change in energy associated with
  the coronal electrical currents suffices to power the flare and its
  associated coronal mass ejection.

---------------------------------------------------------
Title: Resolving the Azimuthal Ambiguity in Vector Magnetogram Data
with the Divergence-Free Condition: Theoretical Examination
Authors: Crouch, A. D.; Barnes, G.
2008SoPh..247...25C    Altcode:
  We demonstrate that the azimuthal ambiguity that is present in
  solar vector magnetogram data can be resolved with line-of-sight
  and horizontal heliographic derivative information by using the
  divergence-free property of magnetic fields without additional
  assumptions. We discuss the specific derivative information that
  is sufficient to resolve the ambiguity away from disk centre, with
  particular emphasis on the line-of-sight derivative of the various
  components of the magnetic field. Conversely, we also show cases where
  ambiguity resolution fails because sufficient line-of-sight derivative
  information is not available. For example, knowledge of only the
  line-of-sight derivative of the line-of-sight component of the field
  is not sufficient to resolve the ambiguity away from disk centre.

---------------------------------------------------------
Title: A Comparison of Flare Forecasting Parameters Derived From
    Photospheric Magnetograms
Authors: Barnes, G.; Leka, K.
2007AGUFMSM41A0314B    Altcode:
  A variety of researchers have proposed parameters for use in
  forecasting of solar flares. However, the parameters have been
  calculated from different data sources, and their performance has
  been judged based on various different criteria. We present here a
  systematic comparison of a small number of parameters which can be
  derived from the photospheric magnetic field, some of which characterize
  the photospheric field itself, and some which characterize the coronal
  magnetic topology. We compute the parameters for a collection of
  over 1200 vector magnetograms from the Imaging Vector Magnetograph
  at Haleakala, and judge their ability to forecast flares based on
  discriminant analysis, climatological skill scores, and the ability
  to provide an "all-clear" forecast.

---------------------------------------------------------
Title: On the Relationship between Coronal Magnetic Null Points and
    Solar Eruptive Events
Authors: Barnes, G.
2007ApJ...670L..53B    Altcode:
  One mechanism that has been proposed for initiating coronal mass
  ejections (CMEs) is the “breakout” model. For this model to
  account for CMEs, a coronal null point must be present prior to the
  eruption. The relationship between the existence of coronal null
  points and eruptive events is investigated using a collection of
  over 1800 vector magnetograms from the Imaging Vector Magnetograph at
  Haleakalā. Each magnetogram is subjected to magnetic charge topology
  analysis, including determining the presence of coronal null points. It
  is found that the majority of events originate in regions above which no
  null point is found. However, a much larger fraction of active regions
  for which a coronal null point was found were the source of an eruption
  than active regions for which no null was found. The implications of
  these results for the breakout model are discussed.

---------------------------------------------------------
Title: Determining the Source of Coronal Helicity through Measurements
    of Braiding and Spin Helicity Fluxes in Active Regions
Authors: Longcope, D. W.; Ravindra, B.; Barnes, G.
2007ApJ...668..571L    Altcode:
  Magnetic helicity has become a valuable tool for understanding the
  energetics and dynamics of coronal magnetic fields. Recently, long
  time sequences of magnetograms have been used to measure the flux of
  helicity into active region coronae. We demonstrate how this helicity
  flux can be usefully decomposed into contributions of differing
  origin, called “spin” helicity and “braiding” helicity. These
  contributions could be envisioned to come at the expense of twist
  and writhe helicity, respectively, of a subphotospheric flux tube
  anchored to the regions. In order to effect this decomposition, each
  magnetogram is partitioned into a set of unipolar regions. We present
  a method of defining such regions so that they persist through the
  sequences and track the photospheric flow. The spin helicity of a
  given region quantifies the mean rotation rate of motions internal
  to that region, while braiding helicity is injected by the motions
  of whole regions about one another. Applying the method to six active
  regions shows cases where either spin or braiding dominates, and where
  they have the same signs and opposite signs. Thus, it would seem that
  no general statement can be made regarding the dominance of twist or
  writhe in supplying helicity to the corona. In one particular case,
  spin and braiding helicity follow different time histories but inject
  equal and opposite net helicities. This suggests that the spinning and
  braiding are driven by a kink instability in the submerged flux tube.

---------------------------------------------------------
Title: Probabilistic forecasting of solar flares from vector
    magnetogram data
Authors: Barnes, G.; Leka, K. D.; Schumer, E. A.; Della-Rose, D. J.
2007SpWea...5.9002B    Altcode:
  Discriminant analysis is a statistical approach for assigning a
  measurement to one of several mutually exclusive groups. Presented here
  is an application of the approach to solar flare forecasting, adapted
  to provide the probability that a measurement belongs to either group,
  the groups in this case being solar active regions which produced
  a flare within 24 hours and those that remained flare quiet. The
  technique is demonstrated for a large database of vector magnetic
  field measurements obtained by the University of Hawai'i Imaging Vector
  Magnetograph. For a large combination of variables characterizing the
  photospheric magnetic field, the results are compared to a Bayesian
  approach for solar flare prediction, and to the method employed by the
  U.S. Space Environment Center (SEC). Although quantitative comparison
  is difficult as the present application provides active region (rather
  than whole-Sun) forecasts, and the present database covers only part
  of one solar cycle, the performance of the method appears comparable
  to the other approaches.

---------------------------------------------------------
Title: Resolving The Azimuthal Ambiguity In Vector Magnetograms Away
    From Disk Centre With The Solenoidal Condition
Authors: Crouch, Ashley D.; Barnes, G.
2007AAS...210.5304C    Altcode: 2007BAAS...39..164C
  We employ the divergence-free property of magnetic fields to resolve
  the azimuthal ambiguity in solar vector magnetograms. We show that
  the ambiguity can be resolved away from disk centre if one knows
  the line-of-sight derivative of the magnetic field components in
  the directions parallel and transverse to the line-of-sight. However,
  knowing only the line-of-sight derivative of the line-of-sight component
  of the magnetic field is not sufficient except at disk centre. Thus,
  multi-height vector magnetogram data can be used to resolve the
  ambiguity provided that all the line-of-sight derivatives can be
  determined reliably. We use a simple theoretical example, consisting of
  two submerged magnetic point sources, to demonstrate our findings. This
  work was supported by funding from NASA/LWS under contract NNH05CC75C.

---------------------------------------------------------
Title: Active Region Magnetic Field Line Twist and Source of Coronal
    Magnetic Helicity.
Authors: Belur, Ravindra; Longcope, D.; Barnes, G.; Nandy, D.
2007AAS...210.2401B    Altcode: 2007BAAS...39..128B
  Magnetic helicity is an important quantity which measures how the
  magnetic field lines are twisted and sheared. Recently it has become
  possible to measure the flux of magnetic helicity in active regions
  using the observational data. These observed helicity fluxes may
  arise due to the twist in the emerging active region flux tubes or it
  may come from the photospheric shearing motion. Here, we decompose
  the helicity flux into two different contributions called spin
  and braiding. These components typically come from twist and writhe
  helicity of a sub-photospheric flux tube anchored to the regions. The
  spin helicity of a given region quantifies the mean rotation rate of
  motion internal to that region and braiding helicity is injected by the
  motions of whole <P />regions about one another. The injected helicity
  flux due to spin and braiding motion leads to the coronal magnetic
  field line twist. The twist determined from vector magnetograms can be
  used to estimate the total helicity content of the coronal field at one
  time. The rate of change of this helicity estimate can be compared to
  the total helicity flux as well as its spin and braiding component. We
  make such a comparison for several active regions.

---------------------------------------------------------
Title: Non-linear Force-free Modeling Of Coronal Magnetic Fields
Authors: Metcalf, Thomas R.; De Rosa, M. L.; Schrijver, C. J.; Barnes,
   G.; van Ballegooijen, A.; Wiegelmann, T.; Wheatland, M. S.; Valori,
   G.; McTiernan, J. M.
2007AAS...210.9102M    Altcode: 2007BAAS...39..204M
  We compare a variety of nonlinear force-free field (NLFFF)
  extrapolation algorithms, including optimization, magneto-frictional,
  and Grad-Rubin-like codes, applied to a solar-like reference
  model. The model used to test the algorithms includes realistic
  photospheric Lorentz forces and a complex field including a weakly
  twisted, right helical flux bundle. The codes were applied to both
  forced "photospheric” and more force-free "chromospheric” vector
  magnetic field boundary data derived from the model. When applied to
  the <P />chromospheric boundary data, the codes are able to recover
  the presence of the flux bundle and the field's free energy, though
  some details of the field connectivity are lost. When the codes are
  applied to the forced photospheric boundary data, the reference
  model field is not well recovered, indicating that the Lorentz
  forces on the photosphere severely impact the extrapolation of the
  field. Preprocessing of the photospheric boundary does improve the
  extrapolations considerably, although the results depend sensitively
  on the details of the numerical codes. When applying the NLFFF codes
  to solar data, the problems associated with Lorentz forces present in
  the low solar atmosphere must be recognized: the various codes will
  not necessarily converge to the correct, or even the same, solution.

---------------------------------------------------------
Title: Photospheric Magnetic Field Properties of Flaring versus
    Flare-quiet Active Regions. IV. A Statistically Significant Sample
Authors: Leka, K. D.; Barnes, G.
2007ApJ...656.1173L    Altcode:
  Statistical tests based on linear discriminant analysis are applied
  to numerous photospheric magnetic parameters, continuing toward
  the goal of identifying properties important for the production of
  solar flares. For this study, the vector field data are University
  of Hawai`i Imaging Vector Magnetograph daily magnetograms obtained
  between 2001 and 2004. Over 1200 separate magnetograms of 496
  numbered active regions comprise the data set. At the soft X-ray
  C1.0 level, 359 magnetograms are considered “flare productive”
  in the 24 hr postobservation. Considering multiple photospheric
  variables simultaneously indicates that combinations of only a few
  familiar variables encompass the majority of the predictive power
  available. However, the choice of which few variables is not unique,
  due to strong correlations among photospheric quantities such as total
  magnetic flux and total vertical current, two of the most powerful
  predictors. The best discriminant functions result from combining one
  of these with additional uncorrelated variables, such as measures
  of the magnetic shear, and successfully classify over 80% of the
  regions. By comparison, a success rate of approximately 70% is achieved
  by simply classifying all regions as “flare quiet.” Redefining
  “flare-productive” at the M1.0 level, parameterizations of excess
  photospheric magnetic energy outperform other variables. However, the
  uniform flare-quiet classification rate is approximately 90%, while
  incorporating photospheric magnetic field information results in at
  most a 93% success rate. Using nonparametric discriminant analysis,
  we demonstrate that the results are quite robust. Thus, we conclude
  that the state of the photospheric magnetic field at any given time
  has limited bearing on whether that region will be flare productive.

---------------------------------------------------------
Title: Topological Estimates of Free-Energy Build-up in Active Regions
Authors: Longcope, D. W.; Barnes, G.; Ravindra, B.; Beveridge, C.
2006AGUFMSH31B..02L    Altcode:
  There is a growing consensus that slow evolution of an active region's
  photospheric flux leads to a build-up in the energy of its coronal
  field. The anchoring of coronal field lines to the photosphere
  defines a connectivity between photospheric footpoints of opposing
  polarities. Due to the corona's extremely high electrical conductivity
  these connections remain unchanged even as the footpoints move. To
  estimate the energy stored this way, we group photospheric footpoints
  into unipolar source regions and reduce the pointwise connectivity
  map to a matrix of connections between regions. The flux in each such
  connection must remain fixed even as the source regions evolve. One
  coronal magnetic field, called the flux constrained equilibrium, has the
  minimum possible energy for a specified connectivity. The free energy
  in this equilibrium provides a lower bound on the free energy in the
  actual field. We obtain such a free-energy lower bounds for several
  observed active regions. Source regions are defined in a magnetogram
  (MDI) time sequence of an active region. As the sources evolve the
  connectivity in a potential field will change, however, the actual
  connectivity will not. The growing disparity between the two is used to
  estimate the free energy stored in the coronal field. Flare reconnection
  will release some portion of this stored energy by changing some of
  the connectivities. We compare these estimates with observational
  signatures of energy release. This work supported by NASA's Living
  with a Star Program and by AFOSR.

---------------------------------------------------------
Title: Estimating Active Region Free Energy and Helicity from the
    Minimum Current Corona Model
Authors: Barnes, G.; Longcope, D. W.; Beveridge, C.; Ravindra, B.;
   Leka, K. D.
2006IAUJD...3E..80B    Altcode:
  We employ the Minimum Current Corona (MCC) model to estimate the amount
  of magnetic free energy and helicity injected into the coronal magnetic
  field of an active region. In the MCC model, each concentration of
  photospheric magnetic flux is represented by a point source, greatly
  simplifying the magnetic topology. Advecting an initial partitioning
  of the flux through a long time series of magnetograms results in
  a persistent set of sources. We show that the centroid velocity of
  a partition compares well with the flux-weighted average over the
  partition of the local correlation tracking velocities. Flux domains,
  bundles of field lines interconnecting pairs of sources, are surrounded
  by separatrix surfaces. The intersection of two separatrices is
  a separator field line, which is the site of reconnection in this
  model. The evolution of the photospheric field causes the sources
  to also evolve, which would lead to changes in the domain fluxes
  to maintain a potential field configuration if reconnection could
  proceed rapidly. However, in the absence of reconnection, currents
  begin to flow to maintain the initial distribution of domain fluxes. The
  minimum energy state occurs when currents flow along the separators. The
  magnitude of the separator currents can be estimated and combined with
  geometrical properties of the separators to give a lower bound to
  the magnetic free energy of the system. The motion of sources about
  one another adds braiding helicity to the system, while the internal
  rotation of a partition adds spin helicity. Starting from an initial
  potential field configuration, changes in the free energy are presented
  for a time series of data for NOAA AR 8210 on 1 May 1998. This work
  was supported by AFOSR, NSF and NASA.

---------------------------------------------------------
Title: Photospheric Magnetic Field Properties of Flaring versus
    Flare-quiet Active Regions. III. Magnetic Charge Topology Models
Authors: Barnes, G.; Leka, K. D.
2006ApJ...646.1303B    Altcode:
  A magnetic charge topology (MCT) model is applied to time series of
  photospheric vector magnetic field data for seven active regions divided
  into epochs classified as flare-quiet and flare-productive. In an
  approach that parallels an earlier study by the authors using quantities
  describing the photospheric properties of the vector magnetic field,
  we define quantities derived from the MCT analysis that quantify the
  complexity and topology of the active region coronal fields. With
  the goal of distinguishing between flare-quiet and flare-imminent
  magnetic topology, the time series are initially displayed for three
  active regions for visual inspection with few clear distinguishing
  characteristics resulting. However, an analysis of all 24 epochs
  using the discriminant analysis statistical approach indicates that
  coronal field topology, derived from the observed photospheric vertical
  field, may indeed hold relevant information for distinguishing these
  populations, although the small sample size precludes a definite
  conclusion. The variables derived from the characterization of coronal
  topology routinely result in higher probabilities of being able to
  distinguish between the two populations than the analogous variables
  derived for the photospheric field.

---------------------------------------------------------
Title: Observations of The Chromospheric Magnetic Field In Solar
    Active Regions
Authors: Leka, K. D.; Metcalf, T. R.; Mickey, D. L.; Barnes, G.
2006IAUJD...3E..53L    Altcode:
  Measuring the magnetic field in solar active regions in all spatial
  and temporal dimensions is a long-standing and ambitious goal in
  solar physics. As the locations of complex and rapidly evolving
  magnetic fields and the source of geo-effective energetic events,
  understanding active region magnetic field generation and evolution
  is extremely an important goal; however, basic physics presents great
  challenges to achieving it. Measuring the chromospheric magnetic field
  in active regions is an important first step beyond routine photospheric
  measurements; important both for basic understanding of active region
  structure but also for the many ramifications coming from chromosphere
  being closer to a force-free state than the photosphere. However,
  it is also a very difficult measurement. In this talk I will describe
  highlights of our group's on-going efforts to understand solar active
  region magnetic field structure via direct observation of the vector
  chromospheric magnetic field. Since late 2003, the U. Hawai`i/Mees
  Solar Observatory's Imaging Vector Magnetograph has routinely
  acquired spectropolarimetry measurements of active regions across
  the Na-I 589.6nm line; from the polarization at the line's near-wings
  approximately 0.007nm from line center we deduce the vector magnetic
  field. The data are specific to active regions, specifically the
  structure, free energy storage and evolution at that low-chromospheric
  layer. I will present recent results from these chromospheric data with
  a focus on the differences between the photosphere and chromosphere,
  and the free energy storage in solar active regions.

---------------------------------------------------------
Title: Modeling And Measuring The Flux Reconnected By The Two-ribbon
    Flare On 2004-11-07
Authors: Longcope, Dana; Beveridge, C.; Qiu, J.; Belur, R.; Barnes, G.
2006SPD....37.0803L    Altcode: 2006BAAS...38R.230L
  Observations of the large two-ribbon flare on 2004-Nov-7 made using SOHO
  and TRACE data are interpreted in terms of a three-dimensional magnetic
  field model. This model predicts the amount of flux reconnected during
  the flare and the energy it would release. These values are compared to
  the flux swept up by the flare ribbons observed by TRACE in 1600 A and
  the energy release inferred by the GOES light curves. The helicity of
  the model field may be independently compared to the helicty injected
  by photospheric motions during the buildup to the flare. The model also
  predicts the sequence in which the reconnections should occur. This
  in turn provide insight into the conversion of mutual helicity into
  self-helicity during the production of a twisted flux rope.This work
  is supported by NASA Grant NAG5-10489 and DoD MURI grant.

---------------------------------------------------------
Title: Progress on Determining What Makes a Flare-Producing Active
    Region
Authors: Leka, K. D.; Barnes, G.
2006SPD....37.2203L    Altcode: 2006BAAS...38R.249L
  We present the results of a large effort to investigate what,
  if anything,can be determined from observations of solar
  photospheric magnetic fieldsconcerning the flare productivity of
  active regions. Different aspects ofthis work include examining the
  temporal variations of the field prior toflare events, and applying the
  Magnetic Charge Topology model in order toquantify the variations of the
  coronal topology prior to flare events.A slightly different approach
  was also investigated, by dropping thetime-sequence data and using a
  statistically significant data-base of"daily" magnetograms. Throughout,
  a statistical evaluation based onDiscriminant Analysis was used
  to determine how the two populations inquestion (flare-producing
  and flare-quiet) could best be differentiated,often using numerous
  variables simultaneously. In this presentation,the results from this
  project will be summarized in the context offlare-forecasting but also
  in the context of applying the results tomodeling efforts.

---------------------------------------------------------
Title: Measuring the Magnetic Free Energy Available for Solar Flares
Authors: Metcalf, Thomas R.; Leka, K. D.; Mickey, D. L.; Barnes, G.
2006SPD....37.0903M    Altcode: 2006BAAS...38..236M
  In this poster we report on recent progress in the effort to measurethe
  magnetic energy available to power solar flares. To directlymeasure the
  free magnetic energy using the virial theorem, themagnetic field must
  be known at an atmospheric height where it isforce-free, i.e. J x B =
  0. In Metcalf, Leka &amp; Mickey (2005) the freeenergy of AR 10486
  was determined just prior to the X10 flare at20:39UT on 29 October
  2003, using vector magnetic field measurementsobtained in the solar
  chromosphere where the field is force-free. Theresults from this study
  are expanded here to a wider investigation ofthe magnetic energy storage
  in flare- and CME-producing activeregions. With appropriate effort and
  instrumentation, directlymeasuring the free energy and its evolution
  may provide a powerfulflare-prediction capability. This research was
  funded by NASAcontract NAG5-12466 and AFOSR contract F49620-03-C-0019.

---------------------------------------------------------
Title: Quantifying the Performance of Force-free Extrapolation
    Methods Using Known Solutions
Authors: Barnes, G.; Leka, K. D.; Wheatland, M. S.
2006ApJ...641.1188B    Altcode:
  We outline a method for quantifying the performance of extrapolation
  methods for magnetic fields. We extrapolate the field for two
  model cases, using a linear force-free approach and a nonlinear
  approach. Each case contains a different topological feature of
  the field that may be of interest in solar energetic events. We are
  able to determine quantitatively whether either method is capable
  of reproducing the topology of the field. In one of our examples, a
  subjective evaluation of the performance of the extrapolation suggests
  that it has performed quite well, while our quantitative score shows
  that this is not the case, indicating the importance of being able
  to quantify the performance. Our method may be useful in determining
  which extrapolation techniques are best able to reproduce a force-free
  field and which topological features can be recovered.

---------------------------------------------------------
Title: Measuring Braiding and Spin Helicity Fluxes in Active Regions
Authors: Belur, R.; Longcope, D. W.; Barnes, G.
2005AGUFMSH11A0248B    Altcode:
  Magnetic helicity has become a valuable theoretical tool for
  understanding the dynamics of the solar corona. The free energy
  stored in the coronal magnetic field can be estimated based on its
  helicity content. Furthermore, rapid release of stored energy must be
  accomplished while preserving the total magnetic helicity. Recently
  long time-sequences of magnetograms have been used to measure the flux
  of helicity into active regions. We demonstrate how this helicity flux
  can be usefully decomposed into a sum of spin helicity terms and an
  overall mutual helicity term. Each magnetogram is partitioned into
  a set of unipolar regions. These must persist through the sequence
  and track the photospheric flow. The spin helicity of a given region
  quantifies the effects of motions internal to that region, while
  braiding helicity is injected by the motions of whole regions about
  one another. Since the terms themselves can be of different signs
  it is possible to re-distribute the coronal helicity by reconnection
  without changing the overall helicity content. This decomposition is
  demonstrated on active region observations.

---------------------------------------------------------
Title: Implementing a Magnetic Charge Topology Model for Solar
    Active Regions
Authors: Barnes, G.; Longcope, D. W.; Leka, K. D.
2005ApJ...629..561B    Altcode:
  Information about the magnetic topology of the solar corona is
  crucial to the understanding of solar energetic events. One approach to
  characterizing the topology that has had some success is magnetic charge
  topology, in which the topology is defined by partitioning the observed
  photospheric field into a set of discrete sources and determining which
  pairs are interlinked by coronal field lines. The level of topological
  activity is then quantified through the transfer of flux between
  regions of differing field line connectivity. We discuss in detail how
  to implement such a model for a time series of vector magnetograms,
  paying particular attention to distinguishing real evolution of the
  photospheric magnetic flux from changes due to variations in atmospheric
  seeing, as well as uncorrelated noise. We determine the reliability
  of our method and estimate the uncertainties in its results. We then
  demonstrate it through an application to NOAA active region 8210,
  which has been the subject of extensive previous study.

---------------------------------------------------------
Title: On the Availability of Sufficient Twist in Solar Active
    Regions to Trigger the Kink Instability
Authors: Leka, K. D.; Fan, Y.; Barnes, G.
2005ApJ...626.1091L    Altcode:
  The question of whether there is sufficient magnetic twist in solar
  active regions for the onset of the kink instability is examined
  using a “blind test” of analysis methods commonly used to interpret
  observational data. “Photospheric magnetograms” are constructed from
  a recently developed numerical simulation of a kink-unstable emerging
  flux rope with nearly constant (negative) wind. The calculation of the
  best-fit linear force-free parameter α<SUB>best</SUB> is applied,
  with the goal of recovering the model input helicity. It is shown
  that for this simple magnetic structure, three effects combine to
  produce an underestimation of the known helicity: (1) the influence of
  horizontal fields with lower local α values within the flux rope; (2)
  an assumed simple relation between α<SUB>best</SUB> and the winding
  rate q does not apply to nonaxis fields in a flux rope that is not
  thin; and (3) the difficulty in interpreting the force-free twist
  parameter measured for a field that is forced. A different method to
  evaluate the magnetic twist in active region flux ropes is presented,
  which is based on evaluating the peak α value at the flux rope
  axis. When applied to data from the numerical simulation, the twist
  component of the magnetic helicity is essentially recovered. Both
  the α<SUB>best</SUB> and the new α<SUB>peak</SUB> methods are then
  applied to observational photospheric vector magnetic field data of
  NOAA AR 7201. The α<SUB>best</SUB> approach is then confounded further
  in NOAA AR 7201 by a distribution of α that contains both signs, as
  is generally observed in active regions. The result from the proposed
  α<SUB>peak</SUB> approach suggests that a larger magnetic twist is
  present in this active region's δ-spot than would have been inferred
  from α<SUB>best</SUB>, by at least a factor of 3. It is argued that
  the magnetic fields in localized active region flux ropes may indeed
  carry greater than 2π winds, and thus the kink instability is a
  possible trigger mechanism for solar flares and coronal mass ejections.

---------------------------------------------------------
Title: The OSIRIS instrument on the Odin spacecraft
Authors: Llewellyn, E.; Lloyd, N. D.; Degenstein, D. A.; Gattinger,
   R. L.; Petelina, S. V.; Bourassa, A. E.; Wiensz, J. T.; Ivanov, E. V.;
   McDade, I. C.; Solheim, B. H.; McConnell, J. C.; Haley, C. S.; von
   Savigny, C.; Sioris, C. E.; McLinden, C. A.; Griffioen, E.; Kaminski,
   J.; Evans, W. F. J.; Puckrin, E.; Strong, K.; Wehrle, V.; Hum, R. H.;
   Kendall, D. J. W.; Matsushita, J.; Murtagh, D. P.; Brohede, S.;
   Stegman, J.; Witt, G.; Barnes, G.; Payne, W. F.; Piché, L.; Smith,
   K.; Warshaw, G.; Deslauniers, D. L.; Marchand, P.; Richardson, E. H.;
   King, R. A.; Wevers, I.; McCreath, W.; Kyrölä, E.; Oikarinen, L.;
   Leppelmeier, G. W.; Auvinen, H.; Megie, G.; Hauchecorne, A.; Lefevre,
   F.; de La Nöe, J.; Ricaud, P.; Frisk, U.; Sjoberg, F.; von Schéele,
   F.; Nordh, L.
2004CaJPh..82..411L    Altcode:
  The optical spectrograph and infrared imager system (OSIRIS) on
  board the Odin spacecraft is designed to retrieve altitude profiles
  of terrestrial atmospheric minor species by observing limb-radiance
  profiles. The grating optical spectrograph (OS) obtains spectra
  of scattered sunlight over the range 280-800 nm with a spectral
  resolution of approximately 1 nm. The Odin spacecraft performs a
  repetitive vertical limb scan to sweep the OS 1 km vertical field of
  view over selected altitude ranges from approximately 10 to 100 km. The
  terrestrial absorption features that are superimposed on the scattered
  solar spectrum are monitored to derive the minor species altitude
  profiles. The spectrograph also detects the airglow, which can be
  used to study the mesosphere and lower thermosphere. The other part of
  OSIRIS is a three-channel infrared imager (IRI) that uses linear array
  detectors to image the vertical limb radiance over an altitude range
  of approximately 100 km. The IRI observes both scattered sunlight and
  the airglow emissions from the oxygen infrared atmospheric band at 1.27
  mum and the OH (3-1) Meinel band at 1.53 mum. A tomographic inversion
  technique is used with a series of these vertical images to derive the
  two-dimensional distribution of the emissions within the orbit plane.

---------------------------------------------------------
Title: Photospheric Magnetic Field Properties of Flaring
vs. Flare-Quiet Active Regions III: Discriminant Analysis of a
    Statistically Significant Database
Authors: Leka, K. D.; Barnes, G.
2004AAS...204.3905L    Altcode: 2004BAAS...36..715L
  Solar active regions are often evaluated for their potential to produce
  energetic events based their magnetic morphology. Quantitatively,
  this information is available using vector magnetic field information
  which is (presently only) routinely gathered from photospheric
  observations. Recently we demonstrated a method of parameterizing vector
  field information such that variations in the magnetic morphology
  and complexity were contained in the statistical description of
  (as examples) the vertical current or magnetic shear angles; it was
  also demonstrated that no single parameter consistently and uniquely
  displayed pre-event variations (Leka &amp; Barnes 2003a). We also
  showed that with Discriminant Analysis (Leka &amp; Barnes 2003b), it is
  possible to distinguish between an event-imminent photospheric magnetic
  state and an event-quiet state -- but only by considering multiple
  variables simultaneously. The limitations of that demonstration were
  primarily due to small-number statistics given the dataset used. <P
  />In the present work, Discriminant Analysis is applied to a very
  different dataset: the daily "survey" magnetograms obtained by the
  U. Hawai`i/Mees Solar Observatory Imaging Vector Magnetograph. In
  this manner, the problem of small-number statistics is relieved and
  advantages available by DA are explored. However, given the daily
  temporal cadence, the focus shifts toward detecting parametric
  thresholds rather than pre-event-specific evolution. Nonetheless,
  the central question remains how to distinguish a region which is
  primed for an energetic event, with results applicable to modeling
  efforts by providing empirical discriminating information as to the
  pre-eruption state of the boundary magnetic field. <P />This effort
  is funded by contract F49620-03-C-0019 through the Air Force Office
  of Scientific Research.

---------------------------------------------------------
Title: Magnetic Topology, Flux Emergence/Reconnection and Velocities
    from a Magnetic Charge Topology Model for Solar Active Regions
Authors: Barnes, G.; Longcope, D. W.; Leka, K. D.
2004AAS...204.3906B    Altcode: 2004BAAS...36..715B
  Magnetic Charge Topology (MCT) models represent the field in the solar
  corona as being due to collection of point magnetic charges located at
  or below the photosphere. These models have the advantage of providing a
  simple quantitative description of the field topology. We apply MCT to
  time series of magnetograms from the U. Hawai`i/Mees Solar Observatory
  Imaging Vector Magnetograph (IVM). We first describe the evolution of
  the magnetic topology of the region, by calculating such quantities
  as the magnetic flux connecting each pair of point sources, and the
  number and locations of magnetic separators, which are likely to be
  the location of reconnection in the solar corona. Using the changes in
  the magnitudes of the point sources, and in the connectivity matrix,
  we estimate the rate at which flux is emerging and submerging through
  the photosphere, and the rate at which reconnection is happening in
  the corona. By tracking the changes in the locations of the sources,
  we are also able to estimate the horizontal velocities. <P />This work
  was performed under Air Force Office of Scientific Research contracts
  F49620-03-C-0019 and F49620-02-C-0191.

---------------------------------------------------------
Title: Observational consequences of a magnetic flux rope topology
Authors: Gibson, S.; Barnes, G.; Demoulin, P.; Fan, Y.; Fisher, G.;
   Leka, K.; Longcope, D.; Mandrini, C.; Metcalf, T.
2003AGUFMSH42B0516G    Altcode:
  We consider the implications of a magnetic flux rope topology for
  the interpretation of observations of sigmoidal active regions. A
  region of tangential magnetic discontinuities can be identified
  using techniques that determine a bald patch (BP) and corresponding
  separatrices or a quasi-separatrix layer (QSL) -- for a flux rope this
  region can be S-shaped, or sigmoidal. If such a region is physically
  driven, current sheets can form yielding conditions appropriate for
  reconnective heating. Using a numerical simulation of an emerging
  flux rope driven by the kink instability, Fan and Gibson (ApJL, 2003)
  showed that current sheets indeed formed a sigmoidal surface. In this
  poster we will demonstrate that the current sheets formed on the BP and
  BP separatrices. Moreover, we will use the results of the numerical
  simulation as proxies for observations: specifically the simulated
  field at the photosphere as proxy for the magnetic boundary condition,
  the sigmoidal current sheets as proxy for the X-ray active region
  emission, and the location of dipped magnetic field lines as proxy
  for a filament. We will then consider to what extent such observations
  might be used to understand and constrain the basic properties of the
  coronal field.

---------------------------------------------------------
Title: Photospheric Magnetic Field Properties of Flaring versus
    Flare-quiet Active Regions. I. Data, General Approach, and Sample
    Results
Authors: Leka, K. D.; Barnes, G.
2003ApJ...595.1277L    Altcode:
  Photospheric vector magnetic field data from the University of
  Hawai'i Imaging Vector Magnetograph, with good spatial and temporal
  sampling, are used to study the question of identifying a preflare
  signature unique to flare events in parameters derived from the
  magnetic vector field, B. In this first of a series of papers, we
  present the data analysis procedure and sample results focusing only
  on three active regions (NOAA Active Regions 8636, 8771, and 0030),
  three flares (two M class and one X class), and (most importantly) a
  flare-quiet epoch in a comparable flare-producing region. Quantities
  such as the distribution of the field morphology, horizontal spatial
  gradients of the field, vertical current, current helicity, “twist”
  parameter α, and magnetic shear angles are parameterized using their
  moments and appropriate summations. The time series of the resulting
  parameterizations are examined one at a time for systematic differences
  in overall magnitude and evolution between the flare and flare-quiet
  examples. The variations expected due to atmospheric seeing changes
  are explicitly included. In this qualitative approach we find (1)
  no obvious flare-imminent signatures from the plain magnetic field
  vector and higher moments of its horizontal gradient or from most
  parameterizations of the vertical current density; (2) counterintuitive
  but distinct flare-quiet implications from the inclination angle
  and higher moments of the photospheric excess magnetic energy; (3)
  flare-specific or flare-productivity signatures, sometimes weak,
  from the lower moments of the field gradients, kurtosis of the
  vertical current density, magnetic twist, current helicity density,
  and magnetic shear angle. The strongest results are, however, that (4)
  in ensuring a flare-unique signature, numerous candidate parameters
  (considering both their variation and overall magnitude) are nullified
  on account of similar behavior in a flare-quiet region, and hence (5)
  considering parameters one at a time in this qualitative manner is
  inadequate. To address these limitations, a quantitative statistical
  approach is presented in Paper II by Leka &amp; Barnes.

---------------------------------------------------------
Title: Photospheric Magnetic Field Properties of Flaring versus
    Flare-quiet Active Regions. II. Discriminant Analysis
Authors: Leka, K. D.; Barnes, G.
2003ApJ...595.1296L    Altcode:
  We apply statistical tests based on discriminant analysis to the wide
  range of photospheric magnetic parameters described in a companion paper
  by Leka &amp; Barnes, with the goal of identifying those properties
  that are important for the production of energetic events such as solar
  flares. The photospheric vector magnetic field data from the University
  of Hawai'i Imaging Vector Magnetograph are well sampled both temporally
  and spatially, and we include here data covering 24 flare-event and
  flare-quiet epochs taken from seven active regions. The mean value
  and rate of change of each magnetic parameter are treated as separate
  variables, thus evaluating both the parameter's state and its evolution,
  to determine which properties are associated with flaring. Considering
  single variables first, Hotelling's T<SUP>2</SUP>-tests show small
  statistical differences between flare-producing and flare-quiet
  epochs. Even pairs of variables considered simultaneously, which do
  show a statistical difference for a number of properties, have high
  error rates, implying a large degree of overlap of the samples. To
  better distinguish between flare-producing and flare-quiet populations,
  larger numbers of variables are simultaneously considered; lower error
  rates result, but no unique combination of variables is clearly the
  best discriminator. The sample size is too small to directly compare the
  predictive power of large numbers of variables simultaneously. Instead,
  we rank all possible four-variable permutations based on Hotelling's
  T<SUP>2</SUP>-test and look for the most frequently appearing variables
  in the best permutations, with the interpretation that they are
  most likely to be associated with flaring. These variables include
  an increasing kurtosis of the twist parameter and a larger standard
  deviation of the twist parameter, but a smaller standard deviation of
  the distribution of the horizontal shear angle and a horizontal field
  that has a smaller standard deviation but a larger kurtosis. To support
  the “sorting all permutations” method of selecting the most frequently
  occurring variables, we show that the results of a single 10-variable
  discriminant analysis are consistent with the ranking. We demonstrate
  that individually, the variables considered here have little ability
  to differentiate between flaring and flare-quiet populations, but with
  multivariable combinations, the populations may be distinguished.

---------------------------------------------------------
Title: Photospheric Magnetic Field Properties of Flaring
vs. Flare-Quiet Active Regions I: Data, General Approach, and
    Statistical Results
Authors: Leka, K. D.; Barnes, G.
2003SPD....34.1615L    Altcode: 2003BAAS...35R.835L
  Photospheric vector magnetic field data from the U. Hawai`i Imaging
  Vector Magnetograph are examined for pre-event signatures unique to
  solar energetic phenomena. Parameters are constructed from B(x,y) to
  describe (for example) the distributions of the field, spatial gradients
  of the field, vertical current, current helicity, ”twist” parameter
  α and magnetic shear angles. A quantitative statistical approach
  employing discriminant analysis and Hotelling's T<SUP>2</SUP>-test is
  applied to the magnitude and temporal evolution of parameters from
  24 flare-event and flare-quiet epochs from seven active regions. <P
  />We demonstrate that (1) when requiring a flare-unique signature,
  numerous candidate parameters are nullified by considering flare-quiet
  epochs, (2) a more robust method exists for estimating error rates
  than conventional ”truth tables”, (3) flaring and flare-quiet
  populations do not necessarily have low error rates for classification
  even when statistically distinguishable, and that (4) simultaneous
  consideration of a large number of variables is required to produce
  acceptable error rates. That is, when the parameters are considered
  individually, they show little ability to differentiate between the
  two populations; multi-variable combinations can discriminate the
  populations and/or result in perfect classification tables. <P />In
  lieu of constructing a single all-variable discriminant function to
  quantify the flare-predictive power of the parameters considered,
  we devise a method whereby all permutations of the four-variable
  discriminant functions are ranked by Hotelling's T<SUP>2</SUP>. We
  present those parameters (e.g. the temporal increase of the kurtosis
  of the spatial distribution of the vertical current density) which
  consistently appear in the best combinations, indicating that they may
  play an important role in defining a pre-event photospheric state. While
  no single combination is clearly the best discriminator, we demonstrate
  here the requisite approach: include flare-quiet epochs as a control
  group for statistical tests of the null hypothesis. <P />This work
  was performed under Air Force Office of Scientific Research contracts
  F49620-00-C-0004 and F49620-03-C-0019.

---------------------------------------------------------
Title: Photospheric Magnetic Field Properties of Flaring
vs. Flare-Quiet Active Regions II: A Magnetic Charge Topology Model
    and Statistical Results
Authors: Barnes, G.; Leka, K. D.; Longcope, D. W.
2003SPD....34.1616B    Altcode: 2003BAAS...35..835B
  The complexity of the coronal magnetic field extrapolated from a
  Magnetic Charge Topology (MCT) model, is examined for pre-event
  signatures unique to solar energetic phenomena. Although extensive
  use has been made of quantities measured at the photosphere, it is
  important to consider the magnetic field in the corona, where (for
  example) the hard X-ray signatures of energy release in solar flares
  are observed. By quantifying the inferred coronal magnetic topology we
  are no longer limited to considering solely the magnetic state of the
  photosphere. <P />MCT is applied to temporally sampled photospheric
  magnetic data from the U. Hawai`i Imaging Vector Magnetograph, for
  24 flare-event and flare-quiet epochs from seven active regions. We
  outline the methodology employed for automating the application of MCT
  to large data sets of complex active regions: partitioning the observed
  B<SUB>z</SUB> at the photosphere, assigning a charge to each partition,
  and using this charge distribution to extrapolate the field in the
  corona. From the resulting field we compute the connectivity matrix
  ψ <SUB>ij</SUB>, the location of null points and the intersection
  of separatrix surfaces, i.e. separator field lines. Parameters are
  constructed to describe, for example, the magnetic connectivities, the
  magnetic flux in those connections, and the number of separators. <P
  />Examining particular events results in no obvious trends in the
  magnitude and temporal evolution of the parameters just prior to
  flare events. Thus, we employ the same quantitative statistical
  approach outlined in Leka and Barnes [this session], i.e. applying
  discriminant analysis and Hotelling's T<SUP>2</SUP>-test, and ranking
  all four-variable discriminant functions as a proxy for a single
  all-variable discriminant function. We present those parameters which
  consistently appear in the best combinations, indicating that they
  may play an important role in defining a pre-event coronal state. <P
  />This work was performed under Air Force Office of Scientific Research
  contracts F49620-00-C-0004, F49620-03-C-0019 and F49620-02-C-0191.

---------------------------------------------------------
Title: Photospheric Magnetic Fields Complexity Variations and
    Solar Flares
Authors: Barnes, G.; Leka, K. D.; Longcope, D. W.
2002AAS...200.6808B    Altcode: 2002BAAS...34..756B
  Do photospheric magnetic fields show systematic changes which precede
  energetic events such as solar flares? The answer has proved elusive. We
  address this question by examining vector magnetic flux maps from
  the U. Hawai`i Imaging Vector Magnetograph (Mickey et al. 1996),
  which obtain full Stokes spectra over entire active regions every
  4 minutes on average. We compare numerous parameters derived from
  the vector magnetograms of flaring active regions to those from
  comparable non-flaring active regions. In addition, we determine
  quantitative measurements of the complexity of the field topology
  using the Minimum-Current Corona analysis (Longcope 1996). The goal
  is to determine quantitative measurements of the complexity of the
  field topology, and determine whether variations in those measures
  correlate with or precede flare events. This project was funded by
  AFOSR contract F49620-00-C-0004.

---------------------------------------------------------
Title: Frequency Dependent Ray Paths in Local Helioseismology
Authors: Barnes, G.; Cally, P. S.
2001PASA...18..243B    Altcode:
  The surface of the Sun is continually oscillating due to sound waves
  encroaching on it from the interior. Measurements of the surface
  velocity are used to infer some of the properties of the regions
  through which the sound waves have propagated. Traditionally,
  this has been done by using a modal decomposition of the surface
  disturbances. However, the use of ray descriptions, in the form
  of acoustic holography or time-distance helioseismology, provides
  an alternative approach which may reveal more detailed information
  about the properties of local phenomena such as sunspots and active
  regions. Fundamental to any such treatment is determining the correct
  ray paths in a given atmosphere. In the simplest approach, the ray
  paths are constructed to minimise the travel time between two points
  (Fermat's principle). However, such an approach is only valid in the
  high frequency limit, ω≫ω<SUP>c</SUP>, N, where ω<SUP>c</SUP>
  is the acoustic cut-off and N the Brunt-Väisälä frequency. Although
  ω<SUP>c</SUP> is often included in time-distance calculations, and N
  occasionally, the same is not true of acoustic holography. We argue
  that this raises concerns about image sharpness. As illustrations,
  representative ray paths are integrated in a realistic solar model to
  show that the Fermat approximation performs poorly for frequencies of
  helioseismic interest. We also briefly discuss the importance of the
  Brunt-Väisälä frequency to the time-distance diagram.

---------------------------------------------------------
Title: Mode Mixing by a Shallow Sunspot
Authors: Barnes, G.; Cally, P. S.
2000SoPh..193..373B    Altcode:
  Sunspots are strong absorbers of f and p modes. A possible
  absorption mechanism is direct conversion to slow magnetoacoustic
  waves. Calculations based on vertical magnetic field models show that
  this works well for f modes, but is inadequate for p modes. Using a very
  simple `shallow spot' model, in which the effects of the magnetic field
  are accounted for solely by a surface condition, we investigate the
  possibility that p modes first scatter into f modes inside the spot,
  which are then more susceptible to conversion to slow modes. We find
  that the coupling between an incident p mode and the internal f mode
  is unlikely to be strong enough to account for the observed absorption,
  but that the incident modes do couple strongly to the acoustic jacket in
  some cases, leading to a region immediately around the sunspot where a
  significant fraction of the surface velocity is due to the jacket modes.

---------------------------------------------------------
Title: Magnetic fields and light element depletion in the Sun
Authors: Charbonneau, P.; Barnes, G.; MacGregor, K. B.
2000IAUJD...5E..14C    Altcode:
  I will first briefly review some important similarities and differences
  in models for the spin-down of solar-type stars, with or without
  internal magnetic fields in their radiative interior. This will
  be followed by a presentation of some simple calculations for
  the main-sequence depletion of Lithium and Beryllium in the Sun,
  in a regime where magnetic fields provide the chief mechanism for
  the internal redistribution of angular momentum. In this model the
  transport of light elements still occurs in response to shear-induced
  small-scale turbulence, following various commonly used prescriptions
  for the transport coefficients. For some (physically reasonable)
  values of model parameters, both internal differential rotation and
  light element abundances end up solar-like at 4.5Gyr. Within this
  framework light element depletion is a sensitive function of the
  strength of the assumed internal magnetic field.

---------------------------------------------------------
Title: On the magnetohydrodynamics of a conducting fluid between
    two flat plates
Authors: Barnes, G.; MacGregor, K. B.
1999PhPl....6.3030B    Altcode:
  The time-dependent flow of a viscous, electrically conducting fluid
  contained within the space between two parallel, semi-infinite,
  perfectly conducting plates is considered. A uniform magnetic field
  directed perpendicular to the plate surfaces is assumed to pervade
  the fluid. Oscillatory motion of one of the plates in its own plane
  is induced through the application of a prescribed acceleration, the
  magnitude and direction of which vary sinusoidally in time. For a system
  forced in this manner, the resulting flow and transverse field component
  are solved for, as well as for the motion of the plate as a function
  of time. The magnetic and viscous stresses exerted on the boundary
  plate by the contiguous field and fluid are explicitly incorporated
  into the treatment of its motion. The physical properties and behavior
  of this system are investigated by examining analytic and numerical
  solutions obtained for a range of forcing periods, Reynolds numbers,
  and plate mass column densities. The relevance of these results to the
  interpretation of a model for Alfvénic torsional oscillations in the
  solar interior are discussed.

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Title: Mode Mixing by a Shallow Sunspot
Authors: Barnes, G.; Cally, P. S.
1999soho....9E..35B    Altcode:
  In a polytropic atmosphere, the oscillation modes are described by
  well-known special functions. However, the presence of a magnetic
  field inside a sunspot makes the mode structure much more complex,
  so that analytic expressions are not available. Recent observations
  of sunspots suggest that most of the scattering and absorption due
  to the spots occurs in a layer immediately below the surface of the
  sun. We have therefore modelled the acoustic modes inside a sunspot by
  assuming that the effect of the magnetic field is concentrated right
  at the surface. Instead of imposing the conventional upper boundary
  condition, that the divergence of the velocity vanish, we require
  that the horizontal component of the velocity vanish, which allows
  us to write down analytic expressions for the acoustic modes inside
  the spot. This may be justified by arguing that a vertical magnetic
  field will tend to inhibit horizontal fluid motions. In effect, we are
  introducing a purely scattering disk to the surface of the sun. More
  realistic models, in which the disk both scatters and absorbs energy are
  also possible. We consider the scattering of an incident p-mode off our
  "sunspot," matching the pressure and horizontal velocity across the
  boundary. The result is a mixing of the incident mode into outgoing
  external p-modes and internal p-modes, as well as jacket modes both
  inside and outside the spot. We find that the inclusion of the jacket
  modes is crucial to satisfying the matching conditions, and we present
  results indicating the spectrum of outgoing and internal modes that
  are present.

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Title: Angular Momentum Transport in Magnetized Stellar Radiative
    Zones. III. The Solar Light-Element Abundances
Authors: Barnes, G.; Charbonneau, P.; MacGregor, K. B.
1999ApJ...511..466B    Altcode:
  We calculate the depletion of the trace elements lithium and beryllium
  within a solar-mass star during the course of its evolution from
  the zero-age main sequence to the age of the present-day Sun. In the
  radiative layers beneath the convection zone, we assume that these
  elements are transported by the turbulent fluid motions that result from
  instability of the shear flow associated with internal differential
  rotation. This turbulent mixing is modeled as a diffusion process,
  using a diffusion coefficient that is taken to be proportional to the
  gradient of the angular velocity distribution inside the star. We study
  the evolution of the light-element abundances produced by rotational
  mixing for models in which internal angular momentum redistribution
  takes place either by hydrodynamic or by hydromagnetic means. Since
  models based on these alternative mechanisms for angular-momentum
  transport predict similar surface rotation rates late in the evolution,
  we explore the extent to which light-element abundances make it possible
  to distinguish between them. In the case of an internally magnetized
  star, our computations indicate that both the details of the surface
  abundance evolution and the magnitude of the depletion at solar age can
  depend sensitively on the assumed strength and configuration of the
  poloidal magnetic field inside the star. For a configuration with no
  direct magnetic coupling between the radiative and convective portions
  of the stellar interior, the depletion of lithium calibrated to the
  solar lithium depletion at the solar age is similar at all ages to
  the lithium depletion of a model in which angular-momentum transport
  occurs solely by hydrodynamical processes. However, the two models can
  be distinguished on the basis of their respective beryllium depletions,
  with the depletion of the magnetic model being significantly smaller
  than that of the nonmagnetic model.

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Title: Gravity Waves in a Magnetized Shear Layer
Authors: Barnes, G.; MacGregor, K. B.; Charbonneau, P.
1998ApJ...498L.169B    Altcode:
  We use the equations governing the propagation of a gravity wave
  in the presence of a background flow and magnetic field to derive,
  in the Boussinesq approximation, dispersion relations for plane wave
  solutions in certain special cases. We show how, under conditions
  typical of the interior of the Sun, the addition of a magnetic field
  may prevent certain wavevectors from propagating and alter the existence
  and position of any critical layer that might absorb the gravity wave.

---------------------------------------------------------
Title: Angular Momentum Transport in Magnetized Stellar Radiative
Zones: The Solar Light Element Abundances
Authors: Barnes, G.; Charbonneau, P.; MacGregor, K. B.
1998ASPC..154..886B    Altcode: 1998csss...10..886B
  We calculate the depletion of the trace elements lithium and beryllium
  within a solar mass star, during the course of its evolution from
  the zero-age main sequence to the age of the present-day Sun. In the
  radiative layers beneath the convection zone, we assume that these
  elements are transported by the turbulent fluid motions that result from
  the instability of the shear flow associated with internal differential
  rotation. This turbulent mixing is modeled as a diffusive process,
  using a diffusion coefficient that is taken to be proportional to the
  gradient of the angular velocity distribution inside the star. We study
  the evolution of the light element abundances produced by rotational
  mixing for models in which internal angular momentum redistribution
  takes place either by hydrodynamic or by hydromagnetic means. Since
  models based on these alternative mechanisms for angular momentum
  transport predict similar surface rotation rates late in the evolution,
  we explore the extent to which light element abundances make it possible
  to distinguish between them. In the case of an internally magnetized
  star, our computations indicate that both the details of the surface
  abundance evolution and the magnitude of the depletion at solar age can
  depend sensitively on the assumed strength and configuration of the
  poloidal magnetic field inside the star. For a configuration with no
  direct magnetic coupling between the radiative and convective portions
  of the stellar interior, the depletion of lithium as a function of
  age is similar to that of a model in which angular momentum transport
  occurs solely by hydrodynamical processes. However, the two models can
  be distinguished on the basis of their respective beryllium depletions,
  with the depletion of the magnetic model being significantly smaller
  than that of the non-magnetic model.

---------------------------------------------------------
Title: Mixing in Low-Mass Stars: The Lithium-Rotation Connection
Authors: Balachandran, Suchitra C.; Garcia Lopez, R. J.; Kraft, R. P.;
   MacGregor, K. B.; Barnes, G.; Martin, E. L.; Pinsonneault, Marc H.
1998ASPC..154..111B    Altcode: 1998csss...10..111B
  We have known for over three decades that the Sun has depleted
  its surface lithium. During this period it has become increasingly
  evident that mixing, unaccounted for by the standard models, occurs
  in the stellar interior. There is some conjecture that this mixing
  may be driven by rotation and thus be dependent upon the rotational
  history of the star. In this discussion session, we will examine the
  observational connection between mixing and rotation and critically
  evaluate current models.