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Author name code: felipe
ADS astronomy entries on 2022-09-14
author:Felipe, Tobias

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Title: Limitations of the Ca II 8542 Å Line for the Determination
    of Magnetic Field Oscillations
Authors: Felipe, Tobias; Socas Navarro, Hector; Sangeetha, C. R.;
   Milic, Ivan
2021ApJ...918...47F    Altcode: 2021arXiv210702160F
  Chromospheric umbral oscillations produce periodic brightenings
  in the core of some spectral lines, known as umbral flashes. They
  are also accompanied by fluctuations in velocity, temperature, and,
  according to several recent works, magnetic field. In this study, we
  aim to ascertain the accuracy of the magnetic field determined from
  inversions of the Ca II 8542 Å line. We have developed numerical
  simulations of wave propagation in a sunspot umbra. Synthetic Stokes
  profiles emerging from the simulated atmosphere were computed and
  then inverted using the NICOLE code. The atmospheres inferred from
  the inversions have been compared with the original parameters from
  the simulations. Our results show that the inferred chromospheric
  fluctuations in velocity and temperature match the known oscillations
  from the numerical simulation. In contrast, the vertical magnetic field
  obtained from the inversions exhibits an oscillatory pattern with a ~300
  G peak-to-peak amplitude, which is absent in the simulation. We have
  assessed the error in the inferred parameters by performing numerous
  inversions with slightly different configurations of the same Stokes
  profiles. We find that when the atmosphere is approximately at rest,
  the inversion tends to favor solutions that underestimate the vertical
  magnetic field strength. On the contrary, during umbral flashes,
  the values inferred from most of the inversions are concentrated at
  stronger fields than those from the simulation. Our analysis provides
  a quantification of the errors associated with the inversions of the
  Ca II 8542 Å line and suggests caution with the interpretation of
  the inferred magnetic field fluctuations.

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Title: Multiple Stokes I inversions for inferring magnetic fields
    in the spectral range around Cr I 5782 Å
Authors: Kuckein, C.; Balthasar, H.; Quintero Noda, C.; Diercke, A.;
   Trelles Arjona, J. C.; Ruiz Cobo, B.; Felipe, T.; Denker, C.; Verma,
   M.; Kontogiannis, I.; Sobotka, M.
2021A&A...653A.165K    Altcode: 2021arXiv210711116K
  <BR /> Aims: In this work, we explore the spectral window containing
  Fraunhofer lines formed in the solar photosphere, around the
  magnetically sensitive Cr I lines at 5780.9, 5781.1, 5781.7, 5783.0,
  and 5783.8 Å, with Landé g-factors between 1.6 and 2.5. The goal is
  to simultaneously analyze 15 spectral lines, comprising Cr I, Cu I,
  Fe I, Mn I, and Si I lines, without the use of polarimetry, to infer
  the thermodynamic and magnetic properties in strongly magnetized
  plasmas using an inversion code. <BR /> Methods: Our study is based
  on a new setup at the Vacuum Tower Telescope (VTT, Tenerife), which
  includes fast spectroscopic scans in the wavelength range around
  the Cr I 5781.75 Å line. The oscillator strengths log(gf) of all
  spectral lines, as well as their response functions to temperature,
  magnetic field, and Doppler velocity, were determined using the Stokes
  Inversion based on Response functions (SIR) code. Snapshot 385 of the
  enhanced network simulation from the Bifrost code serves to synthesize
  all the lines, which are, in turn, inverted simultaneously with SIR to
  establish the best inversion strategy. We applied this strategy to VTT
  observations of a sunspot belonging to NOAA 12723 on 2018 September
  30 and compared the results to full-disk vector field data obtained
  with the Helioseismic and Magnetic Imager (HMI). <BR /> Results: The
  15 simultaneously inverted intensity profiles (Stokes I) delivered
  accurate temperatures and Doppler velocities when compared with the
  simulations. The derived magnetic fields and inclinations achieve
  the best level of accuracy when the fields are oriented along the
  line-of-sight (LOS) and less accurate when the fields are transverse to
  the LOS. In general, the results appear similar to what is reported in
  the HMI vector-field data, although some discrepancies exist. <BR />
  Conclusions: The analyzed spectral range has the potential to deliver
  thermal, dynamic, and magnetic information for strongly magnetized
  features on the Sun, such as pores and sunspots, even without the use
  of polarimetry. The highest sensitivity of the lines is found in the
  lower photosphere, on average, around log τ = −1. The multiple-line
  inversions provide smooth results across the whole field of view
  (FOV). The presented spectral range and inversion strategy will be
  used for future VTT observing campaigns.

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Title: Performance of solar far-side active region neural detection
Authors: Broock, E. G.; Felipe, T.; Asensio Ramos, A.
2021A&A...652A.132B    Altcode: 2021arXiv210609365B
  Context. Far-side helioseismology is a technique used to infer the
  presence of active regions in the far hemisphere of the Sun based on
  the interpretation of oscillations measured in the near hemisphere. A
  neural network has recently been developed to improve the sensitivity
  of the seismic maps to the presence of far-side active regions. <BR
  /> Aims: Our aim is to evaluate the performance of the new neural
  network approach and to thoroughly compare it with the standard
  method commonly applied to predict far-side active regions from seismic
  measurements. <BR /> Methods: We have computed the predictions of active
  regions using the neural network and the standard approach from five
  years of far-side seismic maps as a function of the selected threshold
  in the signatures of the detections. The results have been compared
  with direct extreme ultraviolet observations of the far hemisphere
  acquired with the Solar Terrestrial Relations Observatory. <BR />
  Results: We have confirmed the improved sensitivity of the neural
  network to the presence of far-side active regions. Approximately 96%
  of the active regions identified by the standard method with a strength
  above the threshold commonly employed by previous analyses are related
  to locations with enhanced extreme ultraviolet emission. For this
  threshold, the false positive ratio is 3.75%. For an equivalent
  false positive ratio, the neural network produces 47% more true
  detections. Weaker active regions can be detected by relaxing the
  threshold in their seismic signature. For almost the entire range
  of thresholds, the performance of the neural network is superior
  to that of the standard approach, delivering a higher number of
  confirmed detections and a lower rate of false positives. <BR />
  Conclusions: The neural network is a promising approach for improving
  the interpretation of the seismic maps provided by local helioseismic
  techniques. Additionally, refined predictions of magnetic activity in
  the non-visible solar hemisphere can play a significant role in space
  weather forecasting.

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Title: Signatures of sunspot oscillations and the case for
    chromospheric resonances
Authors: Felipe, Tobías
2021NatAs...5....2F    Altcode: 2020arXiv200710471F; 2020NatAs.tmp..148F
  Sunspots host a large variety of oscillatory phenomena, whose
  properties depend on the nature of the wave modes and the magnetic and
  thermodynamic structure of the spot. Umbral chromospheric oscillations
  exhibit significant differences compared to their photospheric
  counterparts. They show an enhanced power and a shorter dominant period,
  from waves with an amplitude of a few hundred meters per second in the
  five-minute band at the photosphere, to amplitudes of several kilometers
  per second in the three-minute band at the chromosphere. Various models
  have been proposed to explain this behaviour, including the presence
  of a chromospheric resonance cavity between the photosphere and the
  transition region. Jess et al. (2020, Nature Astronomy, 4, 220) claimed
  the detection of observational evidence supporting this model, obtained
  from the comparison of spectropolarimetric observations and numerical
  simulations. Here, it is shown that the observational insight reported
  by Jess et al. is not a common property of sunspots. More importantly,
  numerical modelling also shows that it is not an unequivocal signature
  of an acoustic resonator.

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Title: Downflowing umbral flashes as evidence of standing waves in
    sunspot umbrae
Authors: Felipe, T.; Henriques, V. M. J.; de la Cruz Rodríguez, J.;
   Socas-Navarro, H.
2021A&A...645L..12F    Altcode: 2021arXiv210104188F
  Context. Umbral flashes are sudden brightenings commonly visible
  in the core of some chromospheric lines. Theoretical and numerical
  modeling suggests that they are produced by the propagation of shock
  waves. According to these models and early observations, umbral flashes
  are associated with upflows. However, recent studies have reported
  umbral flashes in downflowing atmospheres. <BR /> Aims: We aim to
  understand the origin of downflowing umbral flashes. We explore how
  the existence of standing waves in the umbral chromosphere impacts the
  generation of flashed profiles. <BR /> Methods: We performed numerical
  simulations of wave propagation in a sunspot umbra with the code
  MANCHA. The Stokes profiles of the Ca II 8542 Å line were synthesized
  with the NICOLE code. <BR /> Results: For freely propagating waves,
  the chromospheric temperature enhancements of the oscillations are
  in phase with velocity upflows. In this case, the intensity core of
  the Ca II 8542 Å atmosphere is heated during the upflowing stage of
  the oscillation. However, a different scenario with a resonant cavity
  produced by the sharp temperature gradient of the transition region
  leads to chromospheric standing oscillations. In this situation,
  temperature fluctuations are shifted backward and temperature
  enhancements partially coincide with the downflowing stage of the
  oscillation. In umbral flash events produced by standing oscillations,
  the reversal of the emission feature is produced when the oscillation
  is downflowing. The chromospheric temperature keeps increasing while
  the atmosphere is changing from a downflow to an upflow. During the
  appearance of flashed Ca II 8542 Å cores, the atmosphere is upflowing
  most of the time, and only 38% of the flashed profiles are associated
  with downflows. <BR /> Conclusions: We find a scenario that remarkably
  explains the recent empirical findings of downflowing umbral flashes
  as a natural consequence of the presence of standing oscillations
  above sunspot umbrae.

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Title: Chromospheric Resonances above Sunspots and Potential
    Seismological Applications
Authors: Felipe, Tobias; Kuckein, Christoph; González Manrique,
   Sergio Javier; Milic, Ivan; Sangeetha, C. R.
2020ApJ...900L..29F    Altcode: 2020arXiv200810623F
  Oscillations in sunspot umbrae exhibit remarkable differences
  between the photosphere and chromosphere. We evaluate two competing
  scenarios proposed for explaining those observations: a chromospheric
  resonant cavity and waves traveling from the photosphere to upper
  atmospheric layers. We have employed numerical simulations to
  analyze the oscillations in both models. They have been compared with
  observations in the low (Na I D<SUB>2</SUB>) and high (He I 10830 Å)
  chromosphere. The nodes of the resonant cavity can be detected as
  phase jumps or power dips, although the identification of the latter
  is not sufficient to claim the existence of resonances. In contrast,
  phase differences between velocity and temperature fluctuations reveal
  standing waves and unequivocally prove the presence of an acoustic
  resonator above umbrae. Our findings offer a new seismic method to probe
  active region chromospheres through the detection of resonant nodes.

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Title: Numerical determination of the cutoff frequency in solar models
Authors: Felipe, T.; Sangeetha, C. R.
2020A&A...640A...4F    Altcode: 2020arXiv200600526F
  Context. In stratified atmospheres, acoustic waves can only propagate
  if their frequency is higher than the cutoff value. The determination of
  the cutoff frequency is fundamental for several topics in solar physics,
  such as evaluating the contribution of the acoustic waves to the
  chromospheric heating or the application of seismic techniques. However,
  different theories provide different cutoff values. <BR /> Aims:
  We developed an alternative method to derive the cutoff frequency
  in several standard solar models, including various quiet-Sun and
  umbral atmospheres. The effects of magnetic field and radiative losses
  on the cutoff are examined. <BR /> Methods: We performed numerical
  simulations of wave propagation in the solar atmosphere using the
  code MANCHA. The cutoff frequency is determined from the inspection
  of phase-difference spectra computed between the velocity signal
  at two atmospheric heights. The process is performed by choosing
  pairs of heights across all the layers between the photosphere and
  the chromosphere to derive the vertical stratification of the cutoff
  in the solar models. Result. The cutoff frequency predicted by the
  theoretical calculations departs significantly from the measurements
  obtained from the numerical simulations. In quiet-Sun atmospheres,
  the cutoff shows a strong dependence on the magnetic field for
  adiabatic wave propagation. When radiative losses are taken into
  account, the cutoff frequency is greatly reduced and the variation
  of the cutoff with the strength of the magnetic field is lower. The
  effect of the radiative losses in the cutoff is necessary to understand
  recent quiet-Sun and sunspot observations. In the presence of inclined
  magnetic fields, our numerical calculations confirm that the cutoff
  frequency is reduced as a result of the reduced gravity experienced by
  waves that propagate along field lines. An additional reduction is also
  found in regions with significant changes in the temperature, which is
  due to the lower temperature gradient along the path of field-guided
  waves. <BR /> Conclusions: Our results show solid evidence that the
  cutoff frequency in the solar atmosphere is stratified. The cutoff
  values are not correctly captured by theoretical estimates. In addition,
  most of the widely used analytical cutoff formulae neglect the effect
  of magnetic fields and radiative losses, whose role is critical for
  determining the evanescent or propagating nature of the waves.

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Title: Chromospheric resonant cavities in umbrae: unequivocal
    detection and seismic applications
Authors: Felipe, T.; Kuckein, C.; González Manrique, S. J.; Milic,
   I.; Sangeetha, C. R.
2020sea..confE.196F    Altcode:
  Umbral chromospheric oscillations exhibit significant differences
  compared to their photospheric counterparts. We evaluate two competing
  scenarios proposed for explaining those observations: a chromospheric
  resonant cavity and waves traveling from the photosphere to upper
  atmospheric layers. The oscillatory signatures of both models have been
  determined from numerical simulations, and they have been compared to
  observations. We find that a high-frequency peak in the He I 10830 Å
  power spectra cannot discriminate between both theories, contrary to the
  claims of Jess et al. (2019). In contrast, phase differences between
  velocity and temperature fluctuations reveal a standing pattern and
  unequivocally prove the presence of an acoustic cavity above umbrae. Our
  findings offer a new seismic method to probe sunspot chromospheres
  through the identification of resonant nodes in phase spectra.

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Title: The magnetic structure and dynamics of a decaying active region
Authors: Kontogiannis, Ioannis; Kuckein, Christoph; González
   Manrique, Sergio Javier; Felipe, Tobias; Verma, Meetu; Balthasar,
   Horst; Denker, Carsten
2020IAUS..354...53K    Altcode:
  We study the evolution of the decaying active region NOAA 12708, from
  the photosphere up to the corona using high resolution, multi-wavelength
  GREGOR observations taken on May 9, 2018. We utilize spectropolarimetric
  scans of the 10830 Å spectral range by the GREGOR Infrared Spectrograph
  (GRIS), spectral imaging time-series in the Na ID<SUP>2</SUP> spectral
  line by the GREGOR Fabry-Pérot Interferometer (GFPI) and context
  imaging in the Ca IIH and blue continuum by the High-resolution Fast
  Imager (HiFI). Context imaging in the UV/EUV from the Atmospheric
  Imaging Assembly (AIA) onboard the Solar Dynamics Observatory (SDO)
  complements our dataset. The region under study contains one pore with a
  light-bridge, a few micro-pores and extended clusters of magnetic bright
  points. We study the magnetic structure from the photosphere up to the
  upper chromosphere through the spectropolarimetric observations in He
  II and Si I and through the magnetograms provided by the Helioseismic
  and Magnetic Imager (HMI). The high-resolution photospheric images
  reveal the complex interaction between granular-scale convective
  motions and a range of scales of magnetic field concentrations in
  unprecedented detail. The pore itself shows a strong interaction with
  the convective motions, which eventually leads to its decay, while,
  under the influence of the photospheric flow field, micro-pores
  appear and disappear. Compressible waves are generated, which are
  guided towards the upper atmosphere along the magnetic field lines of
  the various magnetic structures within the field-of-view. Modelling
  of the He i absorption profiles reveals high velocity components,
  mostly associated with magnetic bright points at the periphery
  of the active region, many of which correspond to asymmetric Si I
  Stokes-V profiles revealing a coupling between upper photospheric
  and upper chromospheric dynamics. Time-series of Na ID<SUP>2</SUP>
  spectral images reveal episodic high velocity components at the same
  locations. State-of-the-art multi-wavelength GREGOR observations allow
  us to track and understand the mechanisms at work during the decay
  phase of the active region.

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Title: Inversions of synthetic umbral flashes: a selection of
    wavelength sampling
Authors: Felipe, T.; Esteban Pozuelo, S.
2019A&A...632A..75F    Altcode: 2019arXiv191013980F
  Context. Imaging spectrographs are popular instruments used to obtain
  solar data. They record quasi-monochromatic images at selected
  wavelength positions. By scanning the spectral range of the line,
  it is possible to obtain bidimensional maps of the field-of-view
  with a moderate spectral resolution. <BR /> Aims: In this work, we
  evaluate the quality of spectropolarimetric inversions obtained from
  various wavelength samplings during umbral flashes. <BR /> Methods:
  We computed numerical simulations of nonlinear wave propagation in
  a sunspot and constructed synthetic Stokes profiles in the Ca II
  8542 Å line during an umbral flash using the NLTE code NICOLE. The
  spectral resolution of the Stokes profiles was downgraded to various
  cases with differences in the wavelength coverage. A large set of
  wavelength samplings was analyzed and the performance of the inversions
  was evaluated by comparing the inferred chromospheric temperature,
  velocity, and magnetic field with the actual values at the chromosphere
  of the numerical simulation. <BR /> Results: The errors in the inverted
  results depend to a large extent on the location of the wavelength
  points across the profile of the line. The inferred magnetic field
  improves with the increase of the spectral resolution. In the case
  of velocity and temperature, low spectral resolution data produce a
  match of the inverted atmospheres with the actual values comparable
  to wavelength samplings with finer resolution, while providing a
  higher temporal cadence in the data acquisition. <BR /> Conclusions:
  We validated the NLTE inversions of spectropolarimetric data from the Ca
  II 8542 Å during umbral flashes, during which the atmosphere undergoes
  sudden dramatic changes due to the propagation of a shock wave. Our
  results favor the use of fine spectral resolution for analyses that
  focus on the inference of the magnetic field, whereas the estimation
  of temperature and velocity fluctuations can be performed with lower
  spectral resolution.

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Title: Improved detection of far-side solar active regions using
    deep learning
Authors: Felipe, T.; Asensio Ramos, A.
2019A&A...632A..82F    Altcode: 2019arXiv191101099F
  Context. The analysis of waves on the visible side of the Sun
  allows the detection of active regions on the far side through local
  helioseismology techniques. Knowing the magnetism in the whole Sun,
  including the non-visible hemisphere, is fundamental for several space
  weather forecasting applications. <BR /> Aims: Seismic identification of
  far-side active regions is challenged by the reduced signal-to-noise
  ratio, and only large and strong active regions can be reliable
  detected. Here we develop a new method to improve the identification
  of active region signatures in far-side seismic maps. <BR /> Methods:
  We constructed a deep neural network that associates the far-side
  seismic maps obtained from helioseismic holography with the probability
  that active regions lie on the far side. The network was trained with
  pairs of helioseismic phase-shift maps and Helioseismic and Magnetic
  Imager (HMI) magnetograms acquired half a solar rotation later, which
  were used as a proxy for the presence of active regions on the far
  side. The method was validated using a set of artificial data, and
  it was also applied to actual solar observations during the period of
  minimum activity of solar cycle 24. <BR /> Results: Our approach shows
  a higher sensitivity to the presence of far-side active regions than
  standard methods that have been applied up to date. The neural network
  can significantly increase the number of detected far-side active
  regions, and will potentially improve the application of far-side
  seismology to space weather forecasting.

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Title: Origin of the chromospheric three-minute oscillations in
    sunspot umbrae
Authors: Felipe, T.
2019A&A...627A.169F    Altcode: 2019arXiv190609797F
  Context. Sunspot umbrae show a change in the dominant period of
  their oscillations from five minutes (3.3 mHz) in the photosphere
  to three minutes (5.5 mHz) in the chromosphere. <BR /> Aims: In this
  paper, we explore the two most popular models proposed to explain the
  three-minute oscillations: the chromospheric acoustic resonator and the
  propagation of waves with frequency above the cutoff value directly from
  lower layers. <BR /> Methods: We employ numerical simulations of wave
  propagation from the solar interior to the corona. Waves are driven
  by a piston at the bottom boundary. We have performed a parametric
  study of the measured chromospheric power spectra in a large number
  of numerical simulations with differences in the driving method, the
  height of the transition region (or absence of transition region),
  the strength of the vertical magnetic field, and the value of the
  radiative cooling time. <BR /> Results: We find that both mechanisms
  require the presence of waves with periods in the three-minute band
  at the photosphere. These waves propagate upward and their amplitude
  increases due to the drop of the density. Their amplification is
  stronger than that of evanescent low-frequency waves. This effect is
  enough to explain the dominant period observed in chromospheric spectral
  lines. However, waves are partially trapped between the photosphere and
  the transition region, forming an acoustic resonator. This chromospheric
  resonant cavity strongly enhances the power in the three-minute
  band. <BR /> Conclusions: The chromospheric acoustic resonator model
  and the propagation of waves in the three-minute band directly from
  the photosphere can explain the observed chromospheric three-minute
  oscillations. They are both important in different scenarios. Resonances
  are produced by waves trapped between the temperature minimum and the
  transition region. Strong magnetic fields and radiative losses remove
  energy from the waves inside the cavity, resulting in resonances with
  weaker amplitude.

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Title: Spiral-shaped wavefronts in a sunspot umbra
Authors: Felipe, T.; Kuckein, C.; Khomenko, E.; Thaler, I.
2019A&A...621A..43F    Altcode: 2018arXiv181011257F
  Context. Solar active regions show a wide variety of oscillatory
  phenomena. The presence of the magnetic field leads to the appearance
  of several wave modes whose behavior is determined by the sunspot
  thermal and magnetic structure. <BR /> Aims: We aim to study the
  relation between the umbral and penumbral waves observed at the high
  photosphere and the magnetic field topology of the sunspot. <BR />
  Methods: Observations of the sunspot in active region NOAA 12662
  obtained with the GREGOR telescope (Observatorio del Teide, Tenerife,
  Spain) were acquired on 2017 June 17. The data set includes a temporal
  series in the Fe I 5435 Å line obtained with the imaging spectrograph
  GREGOR Fabry-Pérot Interferometer (GFPI) and a spectropolarimetric
  raster map acquired with the GREGOR Infrared Spectrograph (GRIS)
  in the 10 830 Å spectral region. The Doppler velocity deduced from
  the restored Fe I 5435 Å line has been determined, and the magnetic
  field vector of the sunspot has been inferred from spectropolarimetric
  inversions of the Ca I 10 839 Å and the Si I 10 827 Å lines. <BR
  /> Results: A two-armed spiral wavefront has been identified in the
  evolution of the two-dimensional velocity maps from the Fe I 5435 Å
  line. The wavefronts initially move counterclockwise in the interior
  of the umbra, and develop into radially outward propagating running
  penumbral waves when they reach the umbra-penumbra boundary. The
  horizontal propagation of the wavefronts approximately follows the
  direction of the magnetic field, which shows changes in the magnetic
  twist with height and horizontal position. <BR /> Conclusions:
  The spiral wavefronts are interpreted as the visual pattern of slow
  magnetoacoustic waves which propagate upward along magnetic field
  lines. Their apparent horizontal propagation is due to their sequential
  arrival to different horizontal positions at the formation height of the
  Fe I 5435 Å line, as given by the inclination and orientation of the
  magnetic field. <P />The movie associated to Fig. 2 is available at <A
  href="https://www.aanda.org/10.1051/0004-6361/201834367/olm">https://www.aanda.org</A>

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Title: Height variation of the cutoff frequency in a sunspot umbra
Authors: Felipe, T.; Kuckein, C.; Thaler, I.
2018A&A...617A..39F    Altcode: 2018arXiv180605856F
  Context. In the solar atmosphere, the acoustic cutoff frequency is
  a local quantity that depends on atmospheric height. It separates
  low-frequency evanescent waves from high-frequency propagating
  waves. <BR /> Aims: We measure the cutoff frequency of slow
  magnetoacoustic waves at various heights of a sunspot umbra and compare
  the results with the estimations from several analytical formulae. <BR
  /> Methods: We analyzed the oscillations in the umbra of a sunspot
  belonging to active region NOAA 12662 observed in the 10 830 Å spectral
  region with the GREGOR Infrared Spectrograph and in the Fe I 5435 Å
  line with the GREGOR Fabry-Pérot Interferometer. Both instruments
  are attached to the GREGOR telescope at the Observatorio del Teide,
  Tenerife, Spain. We computed the phase and amplification spectra between
  the velocity measured from various pairs of lines that sample various
  heights of the solar atmosphere. The cutoff frequency and its height
  variation were estimated from the inspection of the spectra. <BR />
  Results: At the deep umbral photosphere the cutoff frequency is around
  5 mHz and it increases to 6 mHz at higher photospheric layers. At the
  chromosphere the cutoff is 3.1 mHz. A comparison of the observationally
  determined cutoff with the theoretically predicted values reveals
  an agreement in the general trend and a reasonable match at the
  chromosphere, but also significant quantitative differences at the
  photosphere. <BR /> Conclusions: Our analyses show strong evidence of
  the variation of the cutoff frequency with height in a sunspot umbra,
  which is not fully accounted for by current analytical estimations. This
  result has implications for our understanding of wave propagation, the
  seismology of active regions, and the evaluation of heating mechanisms
  based on compressible waves.

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Title: Inversions of synthetic umbral flashes: Effects of scanning
    time on the inferred atmospheres
Authors: Felipe, T.; Socas-Navarro, H.; Przybylski, D.
2018A&A...614A..73F    Altcode: 2018arXiv180205028F
  Context. The use of instruments that record narrowband images at
  selected wavelengths is a common approach in solar observations. They
  allow scanning of a spectral line by sampling the Stokes profiles with
  two-dimensional images at each line position, but require a compromise
  between spectral resolution and temporal cadence. The interpretation
  and inversion of spectropolarimetric data generally neglect changes in
  the solar atmosphere during the scanning of line profiles. <BR /> Aims:
  We evaluate the impact of the time-dependent acquisition of various
  wavelengths on the inversion of spectropolarimetric profiles from
  chromospheric lines during umbral flashes. <BR /> Methods: Numerical
  simulations of nonlinear wave propagation in a sunspot model were
  performed with the code MANCHA. Synthetic Stokes parameters in the Ca
  II 8542 Å line in NLTE were computed for an umbral flash event using
  the code NICOLE. Artificial profiles with the same wavelength coverage
  and temporal cadence from reported observations were constructed and
  inverted. The inferred atmospheric stratifications were compared with
  the original simulated models. <BR /> Results: The inferred atmospheres
  provide a reasonable characterization of the thermodynamic properties
  of the atmosphere during most of the phases of the umbral flash. The
  Stokes profiles present apparent wavelength shifts and other spurious
  deformations at the early stages of the flash, when the shock wave
  reaches the formation height of the Ca II 8542 Å line. These features
  are misinterpreted by the inversion code, which can return unrealistic
  atmospheric models from a good fit of the Stokes profiles. The
  misguided results include flashed atmospheres with strong downflows,
  even though the simulation exhibits upflows during the umbral flash,
  and large variations in the magnetic field strength. <BR /> Conclusions:
  Our analyses validate the inversion of Stokes profiles acquired by
  sequentially scanning certain selected wavelengths of a line profile,
  even in the case of rapidly changing chromospheric events such as
  umbral flashes. However, the inversion results are unreliable during
  a short period at the development phase of the flash.

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Title: Helioseismic Constraints on the Subsurface Flows of the
    Averaged Supergranule
Authors: Braun, Douglas C.; Duvall, Thomas L., Jr.; Felipe, Tobias;
   DeGrave, Kyle
2018tess.conf11506B    Altcode:
  We report progress on constraining the subsurface flow properties
  of supergranulation from helioseismic holography applied to HMI/SDO
  observations of over 63,000 individual supergranules. First, using
  surface-focused measurements, we confirm the advantages of broader
  phase-speed filters in reducing diffraction effects, noted by Duvall
  and collaborators in prior time-distance analyses. Second, we expand
  the type of measurements to include deep-focusing geometries. Third,
  we compare all measurements with predictions made using numerical
  wave-propagation simulations performed with the 3D MANCHA code using
  a number of prescribed flow patterns. These model flows include those
  inferred from prior time-distance analyses as well as a model based
  on results of recent fully-convective MURaM-based computations. While
  the model predictions are in general qualitative agreement with the
  ensemble averaged measurements, no single model is fully consistent
  with the complete set of measurements. This suggests there is room
  for improvement in constraining the subsurface flows. <P />This work
  is supported by NASA grant 80NSSC18K0068 awarded to NWRA, as well as
  by the NASA High-End Computing program at Ames Research Center.

---------------------------------------------------------
Title: Signatures of the impact of flare-ejected plasma on the
    photosphere of a sunspot light bridge
Authors: Felipe, T.; Collados, M.; Khomenko, E.; Rajaguru, S. P.;
   Franz, M.; Kuckein, C.; Asensio Ramos, A.
2017A&A...608A..97F    Altcode: 2017arXiv170806133F
  <BR /> Aims: We investigate the properties of a sunspot light bridge,
  focusing on the changes produced by the impact of a plasma blob ejected
  from a C-class flare. <BR /> Methods: We observed a sunspot in active
  region NOAA 12544 using spectropolarimetric raster maps of the four
  Fe I lines around 15 655 Å with the GREGOR Infrared Spectrograph,
  narrow-band intensity images sampling the Fe I 6173 Å line with
  the GREGOR Fabry-Pérot Interferometer, and intensity broad-band
  images in G-band and Ca II H-band with the High-resolution Fast
  Imager. All these instruments are located at the GREGOR telescope at
  the Observatorio del Teide, Tenerife, Spain. The data cover the time
  before, during, and after the flare event. The analysis is complemented
  with Atmospheric Imaging Assembly and Helioseismic and Magnetic Imager
  data from the Solar Dynamics Observatory. The physical parameters of
  the atmosphere at differents heights were inferred using spectral-line
  inversion techniques. <BR /> Results: We identify photospheric and
  chromospheric brightenings, heating events, and changes in the Stokes
  profiles associated with the flare eruption and the subsequent arrival
  of the plasma blob to the light bridge, after traveling along an
  active region loop. <BR /> Conclusions: The measurements suggest that
  these phenomena are the result of reconnection events driven by the
  interaction of the plasma blob with the magnetic field topology of the
  light bridge. <P />Movies attached to Figs. 1 and 3 are available at <A
  href="http://www.aanda.org/10.1051/0004-6361/201731374/olm">http://www.aanda.org</A>

---------------------------------------------------------
Title: Detection of emission in the Si I 1082.7 nm line core in
    sunspot umbrae
Authors: Orozco Suárez, D.; Quintero Noda, C.; Ruiz Cobo, B.;
   Collados Vera, M.; Felipe, T.
2017A&A...607A.102O    Altcode: 2017arXiv170906773O
  Context. Determining empirical atmospheric models for the solar
  chromosphere is difficult since it requires the observation and
  analysis of spectral lines that are affected by non-local thermodynamic
  equilibrium (NLTE) effects. This task is especially difficult in sunspot
  umbrae because of lower continuum intensity values in these regions
  with respect to the surrounding brighter granulation. Umbral data is
  therefore more strongly affected by the noise and by the so-called
  scattered light, among other effects. <BR /> Aims: The purpose of this
  study is to analyze spectropolarimetric sunspot umbra observations
  taken in the near-infrared Si I 1082.7 nm line taking NLTE effects into
  account. Interestingly, we detected emission features at the line core
  of the Si I 1082.7 nm line in the sunspot umbra. Here we analyze the
  data in detail and offer a possible explanation for the Si I 1082.7 nm
  line emission. <BR /> Methods: Full Stokes measurements of a sunspot
  near disk center in the near-infrared spectral range were obtained
  with the GRIS instrument installed at the German GREGOR telescope. A
  point spread function (PSF) including the effects of the telescope,
  the Earth's atmospheric seeing, and the scattered light was constructed
  using prior Mercury observations with GRIS and the information provided
  by the adaptive optics system of the GREGOR telescope during the
  observations. The data were then deconvolved from the PSF using a
  principal component analysis deconvolution method and were analyzed
  via the NICOLE inversion code, which accounts for NLTE effects in the
  Si I 1082.7 nm line. The information of the vector magnetic field was
  included in the inversion process. <BR /> Results: The Si I 1082.7 nm
  line seems to be in emission in the umbra of the observed sunspot after
  the effects of scattered light (stray light coming from wide angles)
  are removed. We show how the spectral line shape of umbral profiles
  changes dramatically with the amount of scattered light. Indeed, the
  continuum levels range, on average, from 44% of the quiet Sun continuum
  intensity to about 20%. Although very low, the inferred levels are in
  line with current model predictions and empirical umbral models. The Si
  I 1082.7 nm line is in emission after adding more that 30% of scattered
  light so that it is very sensitive to a proper determination of the
  PSF. Additionally, we have thoroughly investigated whether the emission
  is a byproduct of the particular deconvolution technique but have not
  found any evidence to the contrary. Only the circular polarization
  signals seem to be more sensitive to the deconvolution strategy
  because of the larger amount of noise in the umbra. Interestingly,
  current umbral empirical models are not able to reproduce the emission
  in the deconvolved umbral Stokes profiles. The results of the NLTE
  inversions suggests that to obtain the emission in the Si I 1082.7 nm
  line, the temperature stratification should first have a hump located
  at about log τ = -2 and start rising at lower heights when moving into
  the transition region. <BR /> Conclusions: This is, to our knowledge,
  the first time the Si I 1082.7 nm line is seen in emission in sunspot
  umbrae. The results show that the temperature stratification of current
  umbral models may be more complex than expected with the transition
  region located at lower heights above sunspot umbrae. Our finding might
  provide insights into understanding why the sunspot umbra emission in
  the millimeter spectral range is less than that predicted by current
  empirical umbral models.

---------------------------------------------------------
Title: Helioseismic holography of simulated sunspots: dependence of
    the travel time on magnetic field strength and Wilson depression
Authors: Felipe, T.; Braun, D. C.; Birch, A. C.
2017A&A...604A.126F    Altcode: 2017arXiv170509135F
  Improving methods for determining the subsurface structure of sunspots
  from their seismic signature requires a better understanding of the
  interaction of waves with magnetic field concentrations. We aim to
  quantify the impact of changes in the internal structure of sunspots
  on local helioseismic signals. We have numerically simulated the
  propagation of a stochastic wave field through sunspot models with
  different properties, accounting for changes in the Wilson depression
  between 250 and 550 km and in the photospheric umbral magnetic field
  between 1500 and 3500 G. The results show that travel-time shifts at
  frequencies above approximately 3.50 mHz (depending on the phase-speed
  filter) are insensitive to the magnetic field strength. The travel
  time of these waves is determined exclusively by the Wilson depression
  and sound-speed perturbation. The travel time of waves with lower
  frequencies is affected by the direct effect of the magnetic field,
  although photospheric field strengths below 1500 G do not leave a
  significant trace on the travel-time measurements. These results could
  potentially be used to develop simplified travel-time inversion methods.

---------------------------------------------------------
Title: Dependence of sunspot photospheric waves on the depth of the
    source of solar p-modes
Authors: Felipe, T.; Khomenko, E.
2017A&A...599L...2F    Altcode: 2017arXiv170200997F
  Photospheric waves in sunspots moving radially outward at speeds faster
  than the characteristic wave velocities have been recently detected. It
  has been suggested that they are the visual pattern of p-modes excited
  around 5 Mm beneath the sunspot's surface. Using numerical simulations,
  we performed a parametric study of the waves observed at the photosphere
  and higher layers that were produced by sources located at different
  depths beneath the sunspot's surface. The observational measurements
  are consistent with waves driven between approximately 1 Mm and 5 Mm
  below the sunspot's surface.

---------------------------------------------------------
Title: Synthetic polarimetric spectra from stellar prominences
Authors: Felipe, T.; Martínez González, M. J.; Asensio Ramos, A.
2017MNRAS.465.1654F    Altcode: 2016arXiv161009282F
  Stellar prominences detected in rapidly rotating stars serve as probes
  of the magnetism in the corona of cool stars. We have synthesized the
  temporal evolution of the Stokes profiles generated in the He I 10
  830 and 5876 Å triplets during the rotation of a prominence around
  a star. The synthesis was performed with the HAZEL code using a cloud
  model in which the prominence is characterized by a slab located at a
  fixed latitude and height. It accounts for the scattering polarization
  and Zeeman and Hanle effects. Several cases with different prominence
  magnetic field strengths and orientations have been analysed. The
  results show an emission feature that drifts across the profile while
  the prominence is out of the stellar disc. When the prominence eclipses
  the star, the intensity profile shows an absorption. The scattering
  induced by the prominence generates linear polarization signals
  in Stokes Q and U profiles, which are modified by the Hanle effect
  when a magnetic field is present. Due to the Zeeman effect, Stokes V
  profiles show a signal with very low amplitude when the magnetic field
  along the line of sight is different from zero. The estimated linear
  polarization signals could potentially be detected with the future
  spectropolarimeter Mid-resolution InfRAreD Astronomical Spectrograph,
  to be attached to Gran Telescopio Canarias telescope.

---------------------------------------------------------
Title: Forward modeling for local solar seismology
Authors: Felipe, Tobías
2017psio.confE...6F    Altcode:
  No abstract at ADS

---------------------------------------------------------
Title: Three-dimensional structure of a sunspot light bridge
Authors: Felipe, T.; Collados, M.; Khomenko, E.; Kuckein, C.; Asensio
   Ramos, A.; Balthasar, H.; Berkefeld, T.; Denker, C.; Feller, A.;
   Franz, M.; Hofmann, A.; Joshi, J.; Kiess, C.; Lagg, A.; Nicklas, H.;
   Orozco Suárez, D.; Pastor Yabar, A.; Rezaei, R.; Schlichenmaier,
   R.; Schmidt, D.; Schmidt, W.; Sigwarth, M.; Sobotka, M.; Solanki,
   S. K.; Soltau, D.; Staude, J.; Strassmeier, K. G.; Volkmer, R.;
   von der Lühe, O.; Waldmann, T.
2016A&A...596A..59F    Altcode: 2016arXiv161104803F
  Context. Active regions are the most prominent manifestations of solar
  magnetic fields; their generation and dissipation are fundamental
  problems in solar physics. Light bridges are commonly present during
  sunspot decay, but a comprehensive picture of their role in the
  removal of the photospheric magnetic field is still lacking. <BR />
  Aims: We study the three-dimensional configuration of a sunspot,
  and in particular, its light bridge, during one of the last stages of
  its decay. <BR /> Methods: We present the magnetic and thermodynamical
  stratification inferred from full Stokes inversions of the photospheric
  Si I 10 827 Å and Ca I 10 839 Å lines obtained with the GREGOR
  Infrared Spectrograph of the GREGOR telescope at the Observatorio del
  Teide, Tenerife, Spain. The analysis is complemented by a study of
  continuum images covering the disk passage of the active region, which
  are provided by the Helioseismic and Magnetic Imager on board the Solar
  Dynamics Observatory. <BR /> Results: The sunspot shows a light bridge
  with penumbral continuum intensity that separates the central umbra from
  a smaller umbra. We find that in this region the magnetic field lines
  form a canopy with lower magnetic field strength in the inner part. The
  photospheric light bridge is dominated by gas pressure (high-β),
  as opposed to the surrounding umbra, where the magnetic pressure
  is higher. A convective flow is observed in the light bridge. This
  flow is able to bend the magnetic field lines and to produce field
  reversals. The field lines merge above the light bridge and become
  as vertical and strong as in the surrounding umbra. We conclude that
  this occurs because two highly magnetized regions approach each other
  during the sunspot evolution. <P />Movies associated to Figs. 2 and 13
  are available at <A href="http://www.aanda.org">http://www.aanda.org</A>

---------------------------------------------------------
Title: Tracing p-mode Waves from the Photosphere to the Corona in
    Active Regions
Authors: Zhao, Junwei; Felipe, Tobías; Chen, Ruizhu; Khomenko, Elena
2016ApJ...830L..17Z    Altcode:
  Atmosphere above sunspots is abundant with different types
  of waves. Among these waves are running penumbral waves in the
  chromosphere, quasi-periodic oscillations in the lower coronal loops,
  and recently reported running waves in sunspots’ photosphere, all of
  which were interpreted as magnetoacoustic waves by some authors. Are
  these waves in different atmospheric layers related to each other,
  what is the nature of these waves, and where are the ultimate sources
  of these waves? Applying a time-distance helioseismic analysis over a
  suite of multi-wavelength observations above a sunspot, we demonstrate
  that the helioseismic p-mode waves are able to channel up from the
  photosphere through the chromosphere and transition region into the
  corona, and that the magnetoacoustic waves observed in different
  atmospheric layers are a same wave originating from the photosphere
  but exhibiting differently under different physical conditions. We
  also show waves of different frequencies travel along different
  paths, which can be used to derive the physical properties of the
  atmosphere above sunspots. Our numerical simulation of traveling
  of waves from a subphotospheric source qualitatively resembles the
  observed properties of the waves and offers an interpretation of the
  shapes of the wavefronts above the photosphere.

---------------------------------------------------------
Title: Helioseismic Holography of Simulated Sunspots: Magnetic and
    Thermal Contributions to Travel Times
Authors: Felipe, T.; Braun, D. C.; Crouch, A. D.; Birch, A. C.
2016ApJ...829...67F    Altcode: 2016arXiv160804893F
  Wave propagation through sunspots involves conversion between waves of
  acoustic and magnetic character. In addition, the thermal structure
  of sunspots is very different than that of the quiet Sun. As a
  consequence, the interpretation of local helioseismic measurements of
  sunspots has long been a challenge. With the aim of understanding these
  measurements, we carry out numerical simulations of wave propagation
  through sunspots. Helioseismic holography measurements made from
  the resulting simulated wavefields show qualitative agreement with
  observations of real sunspots. We use additional numerical experiments
  to determine, separately, the influence of the thermal structure of the
  sunspot and the direct effect of the sunspot magnetic field. We use the
  ray approximation to show that the travel-time shifts in the thermal
  (non-magnetic) sunspot model are primarily produced by changes in the
  wave path due to the Wilson depression rather than variations in the
  wave speed. This shows that inversions for the subsurface structure
  of sunspots must account for local changes in the density. In some
  ranges of horizontal phase speed and frequency there is agreement
  (within the noise level in the simulations) between the travel times
  measured in the full magnetic sunspot model and the thermal model. If
  this conclusion proves to be robust for a wide range of models, it
  would suggest a path toward inversions for sunspot structure.

---------------------------------------------------------
Title: Magnetic and Thermal Contributions to Helioseismic Travel
    times in Simulated Sunspots
Authors: Braun, Douglas; Felipe, Tobias; Birch, Aaron; Crouch,
   Ashley D.
2016SPD....47.0701B    Altcode:
  The interpretation of local helioseismic measurements of sunspots
  has long been a challenge, since waves propagating through sunspots
  are potentially affected by both mode conversion and changes in the
  thermal structure of the spots. We carry out numerical simulations of
  wave propagation through a variety of models which alternately isolate
  either the thermal or magnetic structure of the sunspot or include
  both of these. We find that helioseismic holography measurements made
  from the resulting simulated wavefields show qualitative agreement
  with observations of real sunspots. Using insight from ray theory,
  we find that travel-time shifts in the thermal (non-magnetic) sunspot
  model are primarily produced by changes in the wave path due to the
  Wilson depression rather than variations in the wave speed. This shows
  that inversions for the subsurface structure of sunspots must account
  for local changes in the density. In some ranges of horizontal phase
  speed and frequency there is agreement (within the noise level of the
  measurements) between the travel times measured in the full magnetic
  sunspot model and the thermal model. If this conclusion proves to
  be robust for a wide range of models, it suggests a path towards
  inversions for sunspot structure. This research has been funded
  by the Spanish MINECO through grant AYA2014-55078-P, by the NASA
  Heliophysics Division through NNX14AD42G and NNH12CF23C, and the NSF
  Solar Terrestrial program through AGS-1127327.

---------------------------------------------------------
Title: Tracing Helioseismic Waves from the Photosphere to the Corona
Authors: Zhao, Junwei; Felipe, Tobias; Chen, Ruizhu; Khomenko, Elena
2016SPD....4730307Z    Altcode:
  Can p-mode waves in sunspots propagate to the chromosphere and the
  corona? And what are their counterparts in different atmospheric
  heights? In order to study the connection between the photospheric
  p-mode waves and the waves observed above the photosphere, we use a
  helioseismic analysis technique, namely time-distance helioseismology,
  and analyze multi-height observations from different instruments. We
  find clear evidences that some p-mode waves in the photosphere, running
  penumbral waves in the chromosphere, and the periodic disturbances in
  the coronal fan structures are actually same magnetoacoustic waves that
  exhibit differently at the different atmospheric heights. The 6-mHz
  waves, with inclined wavefronts, propagate slantingly upward along
  magnetic field lines. The 3-mHz waves, forming backward-'C'-shape
  wavefronts, propagate mostly horizontally. Through numerical
  simulations, we demonstrate that these p-mode waves that can travel
  upward to the corona, possibly originate from sources located a few
  megameters beneath sunspots' surface.

---------------------------------------------------------
Title: Synthetic Observations of Wave Propagation in a Sunspot Umbra
Authors: Felipe, T.; Socas-Navarro, H.; Khomenko, E.
2014ApJ...795....9F    Altcode: 2014arXiv1408.6565F
  Spectropolarimetric temporal series from Fe I λ6301.5 Å and Ca II
  infrared triplet lines are obtained by applying the Stokes synthesis
  code NICOLE to a numerical simulation of wave propagation in a sunspot
  umbra from MANCHA code. The analysis of the phase difference between
  Doppler velocity and intensity core oscillations of the Fe I λ6301.5
  Å line reveals that variations in the intensity are produced by
  opacity fluctuations rather than intrinsic temperature oscillations,
  except for frequencies between 5 and 6.5 mHz. On the other hand, the
  photospheric magnetic field retrieved from the weak field approximation
  provides the intrinsic magnetic field oscillations associated to wave
  propagation. Our results suggest that this is due to the low magnetic
  field gradient of our sunspot model. The Stokes parameters of the
  chromospheric Ca II infrared triplet lines show striking variations as
  shock waves travel through the formation height of the lines, including
  emission self-reversals in the line core and highly abnormal Stokes V
  profiles. Magnetic field oscillations inferred from the Ca II infrared
  lines using the weak field approximation appear to be related with
  the magnetic field strength variation between the photosphere and
  the chromosphere.

---------------------------------------------------------
Title: Influence of Magnetic and Thermal Effects on Helioseismic
    Travel-time Shifts in Sunspot Models
Authors: Felipe, Tobias; Braun, Douglas; Crouch, Ashley D.; Birch,
   Aaron
2014AAS...22420206F    Altcode:
  Sunspots are one of the most prominent manifestations of solar
  magnetic activity and have been studied using local helioseismology for
  decades. Recent modeling and observational studies indicate that the
  interpretation of travel-time shifts is still subject to uncertainties
  regarding the physical causes of the wave perturbations. Numerical wave
  propagation has proved useful in addressing this problem. In this work,
  we have analyzed travel-time shifts obtained from three dimensional
  numerical simulations of wave propagation in a magnetohydrostatic
  sunspot-like atmosphere. In particular, we isolate the individual
  effects of the magnetic field and thermal perturbations on the
  measurements by means of simulations where only one kind of perturbation
  (magnetic or thermal) is included. The resulting travel-time shift maps,
  obtained by applying helioseismic holography to the photospheric Doppler
  signals in the simulated domain, will be compared and discussed. We
  plan to make the artificial data available to the community for the
  development and validation of other helioseismic methods. This work
  is supported by the NASA SDO Science Center program (through contract
  NNH09CE41C) and by the NASA Living With a Star Program (through grant
  NNX14AD42G).

---------------------------------------------------------
Title: Evaluation of the Capability of Local Helioseismology to
    Discern between Monolithic and Spaghetti Sunspot Models
Authors: Felipe, T.; Crouch, A. D.; Birch, A. C.
2014ApJ...788..136F    Altcode: 2014arXiv1405.0036F
  The helioseismic properties of the wave scattering generated
  by monolithic and spaghetti sunspots are analyzed by means of
  numerical simulations. In these computations, an incident f- or p
  <SUB>1</SUB>-mode travels through the sunspot model, which produces
  absorption and phase shift of the waves. The scattering is studied by
  inspecting the wavefield, computing travel-time shifts, and performing
  Fourier-Hankel analysis. The comparison between the results obtained
  for both sunspot models reveals that the differences in the absorption
  coefficient can be detected above noise level. The spaghetti model
  produces a steep increase of the phase shift with the degree of the
  mode at short wavelengths, while mode mixing is more efficient for the
  monolithic model. These results provide a clue for what to look for
  in solar observations to discern the constitution of sunspots between
  the proposed monolithic and spaghetti models.

---------------------------------------------------------
Title: Numerical Simulations of Multiple Scattering of the f-mode
    by Flux Tubes
Authors: Felipe, T.; Crouch, A.; Birch, A.
2013ApJ...775...74F    Altcode: 2013arXiv1308.1139F
  We use numerical simulations to study the absorption and phase shift
  of surface-gravity waves caused by groups of magnetic flux tubes. The
  dependence of the scattering coefficients on the distance between
  the tubes and their positions is analyzed for several cases with two
  or three flux tubes embedded in a quiet Sun atmosphere. The results
  are compared with those obtained neglecting completely or partially
  multiple scattering effects. We show that multiple scattering has a
  significant impact on the absorption measurements and tends to reduce
  the phase shift. We also consider more general cases of ensembles of
  randomly distributed flux tubes, and we have evaluated the effects on
  the scattering measurements of changing the number of tubes included
  in the bundle and the average distance between flux tubes. We find
  that for the longest wavelength incoming waves, multiple scattering
  enhances the absorption, and its efficiency increases with the number
  of flux tubes and the reduction of the distance between them.

---------------------------------------------------------
Title: Three-dimensional Numerical Simulations of Fast-to-Alfvén
    Conversion in Sunspots
Authors: Felipe, T.
2012ApJ...758...96F    Altcode: 2012arXiv1208.5726F
  The conversion of fast waves to the Alfvén mode in a realistic
  sunspot atmosphere is studied through three-dimensional numerical
  simulations. An upward propagating fast acoustic wave is excited
  in the high-β region of the model. The new wave modes generated
  at the conversion layer are analyzed from the projections of the
  velocity and magnetic field in their characteristic directions,
  and the computation of their wave energy and fluxes. The analysis
  reveals that the maximum efficiency of the conversion to the slow
  mode is obtained for inclinations of 25° and low azimuths, while
  the Alfvén wave conversions peak at high inclinations and azimuths
  between 50° and 120°. Downward propagating Alfvén waves appear
  at the regions of the sunspot where the orientation of the magnetic
  field is in the direction opposite to the wave propagation, since at
  these locations the Alfvén wave couples better with the downgoing
  fast magnetic wave which is reflected due to the gradients of the
  Alfvén speed. The simulations show that the Alfvén energy at the
  chromosphere is comparable to the acoustic energy of the slow mode,
  being even higher at high inclined magnetic fields.

---------------------------------------------------------
Title: Scattering of the f-mode by Small Magnetic Flux Elements from
    Observations and Numerical Simulations
Authors: Felipe, T.; Braun, D.; Crouch, A.; Birch, A.
2012ApJ...757..148F    Altcode: 2012arXiv1208.4024F
  The scattering of f-modes by magnetic tubes is analyzed using
  three-dimensional numerical simulations. An f-mode wave packet is
  propagated through a solar atmosphere embedded with three different
  flux tube models that differ in radius and total magnetic flux. A
  quiet-Sun simulation without a tube present is also performed as a
  reference. Waves are excited inside the flux tube and propagate along
  the field lines, and jacket modes are generated in the surroundings
  of the flux tube, carrying 40% as much energy as the tube modes. The
  resulting scattered wave is mainly an f-mode composed of a mixture of m
  = 0 and m = ±1 modes. The amplitude of the scattered wave approximately
  scales with the magnetic flux. A small amount of power is scattered
  into the p <SUB>1</SUB>-mode. We have evaluated the absorption and
  phase shift from a Fourier-Hankel decomposition of the photospheric
  vertical velocities. They are compared with the results obtained
  from the ensemble average of 3400 small magnetic elements observed in
  high-resolution MDI Doppler datacubes. The comparison shows that the
  observed dependence of the phase shift with wavenumber can be matched
  reasonably well with the simulated flux tube model. The observed
  variation of the phase shifts with the azimuthal order m appears to
  depend on details of the ensemble averaging, including possible motions
  of the magnetic elements and asymmetrically shaped elements.

---------------------------------------------------------
Title: Comparison of Numerical and Observational Scattering of the
    f-mode by Small Magnetic Elements
Authors: Felipe, Tobias; Braun, D. C.; Crouch, A. D.; Birch, A. C.
2012AAS...22010906F    Altcode:
  The observed scattering of the f-mode by small magnetic elements
  is studied through Fourier-Hankel analysis and compared with
  three-dimensional numerical simulations of the scattering produced by
  magnetic flux tube models. The numerical setup consists of an f-mode
  wave packet which is propagated through a realistic solar atmosphere
  embedded with a flux tube model. A quiet Sun simulation without a
  tube present is also performed as a reference. Sausage (m=0) and kink
  (m=±1) modes are excited in the flux tube and propagate along the field
  lines, and jacket modes are generated in the surroundings of the flux
  tube, carrying 40% as much energy as the tube modes. The resulting
  scattered wave is mainly an f-mode composed of a mixture of m=0 and
  m=±1 modes. We find the observed dependence of the phase shift with
  wavenumber for an ensemble average of about 3400 magnetic elements
  can be matched reasonably well with the simulated flux tube model. The
  observed variation with azimuthal order m of the phase-shifts appears
  to depend on details of the ensemble averaging, including possible
  motions of the magnetic elements and asymmetrically shaped elements. <P
  />This research has been funded by NASA through projects NNH09CE43C,
  NNH09CF68C, and NNH07CD25C.

---------------------------------------------------------
Title: Magneto-acoustic wave energy in sunspots: observations and
    numerical simulations
Authors: Felipe, T.; Khomenko, E.; Collados, M.; Beck, C.
2011hsa6.conf..630F    Altcode:
  We have reproduced some sunspot wave signatures obtained
  from spectropolarimetric observations through 3D MHD
  numericalsimulations. The results of the simulations arecompared with
  the oscillations observed simultaneously at different heights from the
  SiI lambda10827Å line, HeI lambda10830Å line, the CaII H core and
  the FeI blends at the wings of the CaII H line. The simulations show
  a remarkable agreement with the observations, and we have used them
  to quantify the energy contribution of the magneto-acoustic waves to
  the chromospheric heating in sunspots. Our findings indicate that the
  energy supplied by these waves is 5-10 times lower than the amount
  needed to balance the chromospheric radiative losses.

---------------------------------------------------------
Title: Numerical simulations of scattering of f-modes by magnetic
    flux tubes
Authors: Felipe, Tobias; Birch, Aaron C.; Crouch, Ashley D.; Braun,
   Douglas C.
2011sdmi.confE..80F    Altcode:
  The scattering of the f-mode by a magnetic flux tube is analyzed
  using three-dimensional numerical simulations. An f-mode wave packet
  is propagated through a realistic solar atmosphere embedded with a
  flux tube of 200 km radius and 1600 G field strength. A quiet Sun
  simulation without the tube being present is also performed as a
  reference. Sausage (m=0) and kink (m=± 1) modes are excited in the
  magnetic tube and propagate downward along the field lines, while the
  resulting scattered wave is mainly an f-mode composed of a mixture
  of m=0 and m=± 1 modes. Low power is also scattered into high-order
  acoustic p-modes. We have evaluated the absorption and phase shift
  from a Fourier-Hankel decomposition of the vertical velocities.

---------------------------------------------------------
Title: Magnetoacoustic Wave Energy from Numerical Simulations of an
    Observed Sunspot Umbra
Authors: Felipe, T.; Khomenko, E.; Collados, M.
2011ApJ...735...65F    Altcode: 2011arXiv1104.4138F
  We aim at reproducing the height dependence of sunspot wave signatures
  obtained from spectropolarimetric observations through three-dimensional
  MHD numerical simulations. A magnetostatic sunspot model based on
  the properties of the observed sunspot is constructed and perturbed
  at the photosphere, introducing the fluctuations measured with the Si
  I λ10827 line. The results of the simulations are compared with the
  oscillations observed simultaneously at different heights from the He
  I λ10830 line, the Ca II H core, and the Fe I blends in the wings of
  the Ca II H line. The simulations show a remarkable agreement with the
  observations. They reproduce the velocity maps and power spectra at
  the formation heights of the observed lines, as well as the phase and
  amplification spectra between several pairs of lines. We find that the
  stronger shocks at the chromosphere are accompanied with a delay between
  the observed signal and the simulated one at the corresponding height,
  indicating that shocks shift the formation height of the chromospheric
  lines to higher layers. Since the simulated wave propagation matches
  very well the properties of the observed one, we are able to use the
  numerical calculations to quantify the energy contribution of the
  magnetoacoustic waves to the chromospheric heating in sunspots. Our
  findings indicate that the energy supplied by these waves is too low to
  balance the chromospheric radiative losses. The energy contained at the
  formation height of the lowermost Si I λ10827 line in the form of slow
  magnetoacoustic waves is already insufficient to heat the higher layers,
  and the acoustic energy which reaches the chromosphere is around 3-9
  times lower than the required amount of energy. The contribution of
  the magnetic energy is even lower.

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Title: Local Helioseismology of Small-Scale Magnetic Elements
Authors: Crouch, Ashley D.; Braun, D. C.; Felipe, T.; Birch, A. C.;
   Duvall, T. L.
2011SPD....42.1604C    Altcode: 2011BAAS..43S.1604C
  We will discuss recent progress in the measurement and modeling of the
  interaction of helioseismic waves with small-scale magnetic elements. We
  will present measurements of the Hankel analysis phase shifts
  and absorption coefficients associated with an average small-scale
  magnetic element, measured using ensemble-averaging techniques. We
  will show results from theoretical calculations and the numerical
  simulations of wave interactions with thin magnetic flux tubes. We
  will compare the Hankel analysis measurements with the predictions
  from these theoretical models, and discuss how these results pertain
  to the local helioseismology of magnetic flux concentrations. This
  work is supported by NASA contract NNH09CE43C.

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Title: Magneto-acoustic waves in sunspots from observations and
    numerical simulations
Authors: Felipe, T.; Khomenko, E.; Collados, M.; Beck, C.
2011JPhCS.271a2040F    Altcode: 2010arXiv1009.5512F
  We study the propagation of waves from the photosphere to the
  chromosphere of sunspots. From time series of cospatial Ca II H
  (including its line blends) intensity spectra and polarimetric spectra
  of Si I λ 1082.7 nm and He I λ 1083.0 nm we retrieve the line-of-sight
  velocity at several heights. The analysis of the phase difference and
  amplification spectra shows standing waves for frequencies below 4 mHz
  and propagating waves for higher frequencies, and allows us to infer
  the temperature and height where the lines are formed. Using these
  observational data, we have constructed a model of sunspot, and we
  have introduced the velocity measured with the photospheric Si I λ
  1082.7 nm line as a driver. The numerically propagated wave pattern
  fits reasonably well with the observed using the lines formed at higher
  layers, and the simulations reproduce many of the observed features. The
  observed waves are slow MHD waves propagating longitudinally along
  field lines.

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Title: Multi-layer Study of Wave Propagation in Sunspots
Authors: Felipe, T.; Khomenko, E.; Collados, M.; Beck, C.
2010ApJ...722..131F    Altcode: 2010arXiv1008.4004F
  We analyze the propagation of waves in sunspots from the photosphere
  to the chromosphere using time series of co-spatial Ca II H intensity
  spectra (including its line blends) and polarimetric spectra of Si
  I λ10,827 and the He I λ10,830 multiplet. From the Doppler shifts
  of these lines we retrieve the variation of the velocity along the
  line of sight at several heights. Phase spectra are used to obtain
  the relation between the oscillatory signals. Our analysis reveals
  standing waves at frequencies lower than 4 mHz and a continuous
  propagation of waves at higher frequencies, which steepen into shocks
  in the chromosphere when approaching the formation height of the Ca
  II H core. The observed nonlinearities are weaker in Ca II H than in
  He I lines. Our analysis suggests that the Ca II H core forms at a
  lower height than the He I λ10,830 line: a time delay of about 20 s is
  measured between the Doppler signal detected at both wavelengths. We fit
  a model of linear slow magnetoacoustic wave propagation in a stratified
  atmosphere with radiative losses according to Newton's cooling law to
  the phase spectra and derive the difference in the formation height
  of the spectral lines. We show that the linear model describes well
  the wave propagation up to the formation height of Ca II H, where
  nonlinearities start to become very important.

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Title: Magneto-acoustic Waves in Sunspots: First Results From a New
    Three-dimensional Nonlinear Magnetohydrodynamic Code
Authors: Felipe, T.; Khomenko, E.; Collados, M.
2010ApJ...719..357F    Altcode: 2010arXiv1006.2998F
  Waves observed in the photosphere and chromosphere of sunspots
  show complex dynamics and spatial patterns. The interpretation
  of high-resolution sunspot wave observations requires modeling
  of three-dimensional (3D) nonlinear wave propagation and mode
  transformation in the sunspot upper layers in realistic spot model
  atmospheres. Here, we present the first results of such modeling. We
  have developed a 3D nonlinear numerical code specially designed to
  calculate the response of magnetic structures in equilibrium to an
  arbitrary perturbation. The code solves the 3D nonlinear MHD equations
  for perturbations; it is stabilized by hyper-diffusivity terms and is
  fully parallelized. The robustness of the code is demonstrated by a
  number of standard tests. We analyze several simulations of a sunspot
  perturbed by pulses of different periods at a subphotospheric level,
  from short periods, introduced for academic purposes, to longer and
  realistic periods of 3 and 5 minutes. We present a detailed description
  of the 3D mode transformation in a non-trivial sunspot-like magnetic
  field configuration, including the conversion between fast and slow
  magneto-acoustic waves and the Alfvén wave, by calculation of the wave
  energy fluxes. Our main findings are as follows: (1) the conversion from
  acoustic to the Alfvén mode is only observed if the driving pulse is
  located out of the sunspot axis, but this conversion is energetically
  inefficient; (2) as a consequence of the cutoff effects and refraction
  of the fast magneto-acoustic mode, the energy of the evanescent waves
  with periods around 5 minutes remains almost completely below the level
  β = 1; (3) waves with frequencies above the cutoff propagate field
  aligned to the chromosphere and their power becomes dominating over that
  of evanescent 5 minute oscillations, in agreement with observations.

---------------------------------------------------------
Title: Mode transformation and frequency change with height in 3D
    numerical simulations of magneto-acoustic wave propagation in sunspots
Authors: Felipe, T.; Khomenko, E.; Collados, M.
2010arXiv1005.3684F    Altcode:
  Three-dimensional numerical simulations of magnetoacoustic wave
  propagation are performed in a sunspot atmosphere with a computational
  domain covering from the photosphere to the chromosphere. The
  wave source, with properties resembling the solar spectrum, is
  located at different distances from the axis of the sunspot for
  each simulation. These results are compared with the theory of mode
  transformation and also with observational features. Simulations show
  that the dominant oscillation frequency in the chromosphere decreases
  with the radial distance from the sunspot axis. The energy flux of the
  different wave modes involved, including de Alfvén mode, is evaluated
  and discussed.

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Title: Ondas MHD en la fotosfera y cromosfera de manchas solares
Authors: Felipe, Tobías
2010PhDT.......165F    Altcode:
  No abstract at ADS

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Title: Observational Signatures of Numerically Simulated MHD Waves
    in Small-scale Flux Sheets
Authors: Khomenko, E.; Collados, M.; Felipe, T.
2009ASPC..405..183K    Altcode: 2008arXiv0801.3966K
  We present some results obtained from the synthesis of Stokes profiles
  in small-scale flux sheets with propagating MHD waves. To that aim,
  2D flux sheets showing internal structure have been excited with 5
  min period drivers, allowing non-linear waves to propagate inside the
  magnetic structure. The observational signatures of these waves in
  Stokes profiles of several spectral lines that are commonly used in
  spectropolarimetric measurements are discussed.

---------------------------------------------------------
Title: Multi-layer Study of Wave Propagation in Sunspots
Authors: Felipe, T.; Khomenko, E.; Collados, M.; Beck, C.
2008ESPM...12.2.12F    Altcode:
  Observations in different spectral lines give us information about
  the different layers of the solar atmosphere. Here we analyze
  the propagation of waves in sunspots from the photosphere to the
  chromosphere using time series of cospatial Ca II H intensity
  spectra and polarimetric spectra of Si I 10827 A and He I 10830
  A multiplet. From the Doppler shifts of these lines we retrieve
  the temporal variations of the velocity along the line-of-sight
  at several heights. Phase spectra are used to get the relation
  between oscillatory signals measured at each spectral signature. Our
  analysis reveals standing waves for frequencies lower than 3.5 mHz and
  propagating waves for higher frequencies, which steepen into shocks
  in the chromosphere. Oscillations are detectable in Ca II H wings and
  they are propagated along line wing layers to the line core. Ca II H
  core forms at a lower height than the He I 10830 A line. A time delay
  of about 30 s is measured between the Doppler signals detected at both
  wavelengths. We also find that in "cold" sunspots the Si I 10827 A forms
  deeper than in the quiet sun. This type of measurements demonstrate
  the importance of simultaneous co-spatial observations at different
  wavelengths. Future infrastructures, such as GREGOR and EST, should
  include multi-wavelength capabilities to make possible the study of
  the photosphere-chromosphere connection with the highest spatial and
  temporal resolution.

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Title: Nonlinear Numerical Simulations of Magneto-Acoustic Wave
    Propagation in Small-Scale Flux Tubes
Authors: Khomenko, E.; Collados, M.; Felipe, T.
2008SoPh..251..589K    Altcode: 2008SoPh..tmp...32K; 2007arXiv0710.3335K
  We present results of nonlinear, two-dimensional, numerical simulations
  of magneto-acoustic wave propagation in the photosphere and chromosphere
  of small-scale flux tubes with internal structure. Waves with realistic
  periods of three to five minutes are studied, after horizontal and
  vertical oscillatory perturbations are applied to the equilibrium
  model. Spurious reflections of shock waves from the upper boundary
  are minimized by a special boundary condition. This has allowed us to
  increase the duration of the simulations and to make it long enough to
  perform a statistical analysis of oscillations. The simulations show
  that deep horizontal motions of the flux tube generate a slow (magnetic)
  mode and a surface mode. These modes are efficiently transformed
  into a slow (acoustic) mode in the v<SUB>A</SUB>&lt;c<SUB>S</SUB>
  atmosphere. The slow (acoustic) mode propagates vertically along
  the field lines, forms shocks, and remains always within the flux
  tube. It might effectively deposit the energy of the driver into the
  chromosphere. When the driver oscillates with a high frequency, above
  the cutoff, nonlinear wave propagation occurs with the same dominant
  driver period at all heights. At low frequencies, below the cutoff,
  the dominant period of oscillations changes with height from that
  of the driver in the photosphere to its first harmonic (half period)
  in the chromosphere. Depending on the period and on the type of the
  driver, different shock patterns are observed.