explanation      blue bibcodes open ADS page with paths to full text
Author name code: vitas
ADS astronomy entries on 2022-09-14
author:"Vitas, Nikola" 

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Title: Modeling the thermal conduction in the solar atmosphere with
    the code MANCHA3D
Authors: Navarro, A.; Khomenko, E.; Modestov, M.; Vitas, N.
2022A&A...663A..96N    Altcode: 2022arXiv220508846N
  Context. Thermal conductivity is one of the important mechanisms of
  heat transfer in the solar corona. In the limit of strongly magnetized
  plasma, it is typically modeled by Spitzer's expression where the
  heat flux is aligned with the magnetic field. <BR /> Aims: This paper
  describes the implementation of the heat conduction into the code
  MANCHA3D with an aim of extending single-fluid MHD simulations from
  the upper convection zone into the solar corona. <BR /> Methods:
  Two different schemes to model heat conduction are implemented:
  (1) a standard scheme where a parabolic term is added to the energy
  equation, and (2) a scheme where the hyperbolic heat flux equation is
  solved. <BR /> Results: The first scheme limits the time step due to the
  explicit integration of a parabolic term, which makes the simulations
  computationally expensive. The second scheme solves the limitations
  on the time step by artificially limiting the heat conduction speed
  to computationally manageable values. The validation of both schemes
  is carried out with standard tests in one, two, and three spatial
  dimensions. Furthermore, we implement the model for heat flux derived by
  Braginskii (1965, Reviews of Plasma Physics, 205) in its most general
  form, when the expression for the heat flux depends on the ratio of
  the collisional to cyclotron frequencies of the plasma, and, therefore
  on the magnetic field strength. Additionally, our implementation
  takes into account the heat conduction in parallel, perpendicular,
  and transverse directions, and provides the contributions from ions
  and electrons separately. The model recovers Spitzer's expression
  for parallel thermal conductivity in the strongly magnetized limit
  but also transitions smoothly between field-aligned conductivity
  and isotropic conductivity for regions with a low or null magnetic
  field. We describe the details of the implementation of Braginskii's
  thermal conductivity using a combination of the first scheme for the
  perpendicular and transverse directions and the second scheme for the
  parallel component. We estimate thermal conductivities in a quiet-Sun
  model. In this model, we find that the perpendicular and transverse
  components for electrons and ions and the parallel component for
  ions might have some significance below the transition region. Above
  the transition region only the parallel component for ions might
  be important. Finally, we present a two-dimensional test for heat
  conduction using realistic values of the solar atmosphere where we
  prove the robustness of the two schemes implemented and show that our
  adaptation of the hyperbolic treatment offers a great advantage over
  the computational cost of the simulations.

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Title: Newly formed downflow lanes in exploding granules in the
    solar photosphere
Authors: Ellwarth, M.; Fischer, C. E.; Vitas, N.; Schmiz, S.;
   Schmidt, W.
2021A&A...653A..96E    Altcode: 2021arXiv210700582E
  Context. Exploding granules have drawn renewed interest because of
  their interaction with the magnetic field (either emerging or already
  present). Especially the newly forming downflow lanes developing in
  their centre seem to be eligible candidates for the intensification
  of magnetic fields. We analyse spectroscopic data from two different
  instruments in order to study the intricate velocity pattern within
  the newly forming downflow lanes in detail. <BR /> Aims: We aim to
  examine general properties of a number of exploding granules, such
  as their lifetime and extend. To gain a better understanding of the
  formation process of the developing intergranular lane in exploding
  granules, we study the temporal evolution and height dependence of the
  line-of-sight velocities at their formation location. Additionally, we
  search for evidence that exploding granules act as acoustic sources. <BR
  /> Methods: We investigated the evolution of several exploding granules
  using data taken with the Interferometric Bidimensional Spectrometer and
  the Imaging Magnetograph eXperiment. Velocities for different heights
  of the solar atmosphere were determined by computing bisectors of the
  Fe I 6173.0 Å and the Fe I 5250.2 Å lines. We performed a wavelet
  analysis to study the intensity and velocity oscillations within
  and around exploding granules. We also compared our observational
  findings with predictions of numerical simulations. <BR /> Results:
  Exploding granules have significantly longer lifetimes (10 to 15 min)
  than regular granules. Exploding granules larger than 3.8″ form an
  independent intergranular lane during their decay phase, while smaller
  granules usually fade away or disappear into the intergranular area
  (we find only one exception of a smaller exploding granule that also
  forms an intergranular lane). For all exploding granules that form a new
  intergranular downflow lane, we find a temporal height-dependent shift
  with respect to the maximum of the downflow velocity. Our suggestion
  that this results from a complex atmospheric structure within the newly
  forming downflow lane is supported by the comparison with synthesised
  profiles inferred from the simulations. We found an enhanced wavelet
  power with periods between 120 s to 190 s seen in the intensity and
  velocity oscillations of high photospheric or chromospheric spectral
  lines in the region of the dark core of an exploding granule.

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Title: Modeling of 3d Atmospheres of Cool Stars with the Mancha Code
Authors: Perdomo, Andrea; Vitas, Nikola; Khomenko, Elena; Collados,
   Manuel
2021csss.confE.129P    Altcode:
  The first results of the application of the MANCHA code to the case of
  stars beyond the solar case are presented: hydrodynamical simulations
  of stars of spectral type K0V and M0V compared with the solar case.

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Title: Influence of ambipolar and Hall effects on vorticity in
    three-dimensional simulations of magneto-convection
Authors: Khomenko, E.; Collados, M.; Vitas, N.; González-Morales,
   P. A.
2021RSPTA.37900176K    Altcode: 2020arXiv200909753K
  This paper presents the results of the analysis of three-dimensional
  simulations of solar magneto-convection that include the joint action of
  the ambipolar diffusion and the Hall effect. Three simulation runs are
  compared: one including both ambipolar diffusion and the Hall effect;
  one including only ambipolar diffusion and one without any of these
  two effects. The magnetic field is amplified from initial field to
  saturation level by the action of turbulent local dynamo. In each of
  these cases, we study 2 h of simulated solar time after the local
  dynamo reaches the saturation regime. We analyse the power spectra
  of vorticity, of magnetic field fluctuations and of the different
  components of the magnetic Poynting flux responsible for the transport
  of vertical or horizontal perturbations. Our preliminary results show
  that the ambipolar diffusion produces a strong reduction of vorticity
  in the upper chromospheric layers and that it dissipates the vortical
  perturbations converting them into thermal energy. The Hall effect
  acts in the opposite way, strongly enhancing the vorticity. When the
  Hall effect is included, the magnetic field in the simulations becomes,
  on average, more vertical and long-lived flux tube-like structures are
  produced. We trace a single magnetic structure to study its evolution
  pattern and the magnetic field intensification, and their possible
  relation to the Hall effect. <P />This article is part of the Theo
  Murphy meeting issue `High-resolution wave dynamics in the lower
  solar atmosphere'.

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Title: Joint action of Hall and ambipolar effects in 3D
    magneto-convection simulations of the quiet Sun. I. Dissipation and
    generation of waves
Authors: González-Morales, P. A.; Khomenko, E.; Vitas, N.; Collados,
   M.
2020A&A...642A.220G    Altcode: 2020arXiv200810429G
  The partial ionization of the solar plasma causes several nonideal
  effects such as the ambipolar diffusion, the Hall effect, and the
  Biermann battery effect. Here we report on the first three-dimensional
  realistic simulations of solar local dynamo where all three effects
  were taken into account. The simulations started with a snapshot of
  already saturated battery-seeded dynamo, where two new series were
  developed: one with solely ambipolar diffusion and another one also
  taking into account the Hall term in the generalized Ohm's law. The
  simulations were then run for about 4 h of solar time to reach the
  stationary regime and improve the statistics. In parallel, a purely
  MHD dynamo simulation was also run for the same amount of time. The
  simulations are compared in a statistical way. We consider the average
  properties of simulation dynamics, the generation and dissipation
  of compressible and incompressible waves, and the magnetic Poynting
  flux. The results show that, with the inclusion of the ambipolar
  diffusion, the amplitudes of the incompressible perturbations related
  to Alfvén waves are reduced, and the Poynting flux is absorbed, with
  a frequency dependence. The Hall effect causes the opposite action:
  significant excess of incompressible perturbations is generated and an
  excess of the Poynting flux is observed in the chromospheric layers. The
  model with ambipolar diffusion shows, on average, sharper current
  sheets and slightly more abundant fast magneto-acoustic shocks in the
  chromosphere. The model with the Hall effect has higher temperatures at
  the lower chromosphere and stronger and more vertical magnetic field
  concentrations all over the chromosphere. The study of high-frequency
  waves reveals that significant power of incompressible perturbations
  is associated with areas with intense and more vertical magnetic
  fields and larger temperatures. This behavior explains the large
  Poynting fluxes in the simulations with the Hall effect and provides
  confirmation as to the role of Alfvén waves in chromospheric heating
  in internetwork regions, under the action of both Hall and ambipolar
  effects. We find a positive correlation between the magnitude of the
  ambipolar heating and the temperature increase at the same location
  after a characteristic time of 10<SUP>2</SUP> s.

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Title: Local dynamo in stars beyond the Sun: Study for a K0V star
Authors: Perdomo García, A.; Vitas, N.; Khomenko, E.; Collados Vera,
   M. A.
2020sea..confE.206P    Altcode:
  We present the first results of application of the MANCHA3D code (Felipe
  2010; Khomenko et al. 2017, 2018) to a K0V cool star. Initially we run
  the code solving purely hydrodynamic equations until the stationary
  convection is reached. Then we produce the magnetic field generation
  and amplification by Biermann's battery seed and local dynamo. We find
  values around 100 Gauss for the amplified saturated magnetic field,
  similar to those found in Khomenko et al. (2017) for the solar case.

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Title: Comparison of Parameters from Three-Dimensional
    Magnetoconvection Simulations of the Solar Photosphere
Authors: Cubas Armas, M.; Fabbian, D.; Vitas, N.
2019ASPC..526..195C    Altcode:
  We present preliminary results from a comparison of parameters
  derived from three-dimensional magnetohydrodynamic simulations of a
  plage obtained with the MURaM and STAGGER codes. We first compared the
  computed atmospheric physical parameters stored in the output temporal
  snapshots. Subsequently, we used the same snapshots as input to perform
  spectral synthesis calculations using the NICOLE code. We compared
  the synthetic Fe I 630.1 nm and 630.2 nm spectral lines in terms
  of central intensity, equivalent width, full width at half maximum,
  as well as area and amplitude asymmetry of the Stokes V profile.

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Title: Three-dimensional simulations of solar magneto-convection
    including effects of partial ionization
Authors: Khomenko, E.; Vitas, N.; Collados, M.; de Vicente, A.
2018A&A...618A..87K    Altcode: 2018arXiv180701061K
  In recent decades, REALISTIC three-dimensional
  radiative-magnetohydrodynamic simulations have become the dominant
  theoretical tool for understanding the complex interactions between the
  plasma and magnetic field on the Sun. Most of such simulations are based
  on approximations of magnetohydrodynamics, without directly considering
  the consequences of the very low degree of ionization of the solar
  plasma in the photosphere and bottom chromosphere. The presence of a
  large amount of neutrals leads to a partial decoupling of the plasma and
  magnetic field. As a consequence, a series of non-ideal effects, i.e.,
  the ambipolar diffusion, Hall effect, and battery effect, arise. The
  ambipolar effect is the dominant in the solar chromosphere. We
  report on the first three-dimensional realistic simulations
  of magneto-convection including ambipolar diffusion and battery
  effects. The simulations are carried out using the newly developed
  MANCHA3Dcode. Our results reveal that ambipolar diffusion causes
  measurable effects on the amplitudes of waves excited by convection
  in the simulations, on the absorption of Poynting flux and heating,
  and on the formation of chromospheric structures. We provide a low
  limit on the chromospheric temperature increase owing to the ambipolar
  effect using the simulations with battery-excited dynamo fields. <P
  />The movies associated to Figs. 16 and 17 are available at <A
  href="https://www.aanda.org/10.1051/0004-6361/201833048/olm">https://www.aanda.org</A>

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Title: Numerical simulations of quiet Sun magnetic fields seeded by
    the Biermann battery
Authors: Khomenko, E.; Vitas, N.; Collados, M.; de Vicente, A.
2017A&A...604A..66K    Altcode: 2017arXiv170606037K
  The magnetic fields of the quiet Sun cover at any time more than
  90% of its surface and their magnetic energy budget is crucial to
  explain the thermal structure of the solar atmosphere. One of the
  possible origins of these fields is the action of the local dynamo
  in the upper convection zone of the Sun. Existing simulations of the
  local solar dynamo require an initial seed field and sufficiently
  high spatial resolution in order to achieve the amplification of the
  seed field to the observed values in the quiet Sun. Here we report
  an alternative model of seeding based on the action of the Bierman
  battery effect. This effect generates a magnetic field due to the
  local imbalances in electron pressure in the partially ionized solar
  plasma. We show that the battery effect self-consistently creates from
  zero an initial seed field of a strength of the order of micro G, and
  together with dynamo amplification allows the generation of quiet Sun
  magnetic fields of a similar strength to those from solar observations.

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Title: DeepVel: Deep learning for the estimation of horizontal
    velocities at the solar surface
Authors: Asensio Ramos, A.; Requerey, I. S.; Vitas, N.
2017A&A...604A..11A    Altcode: 2017arXiv170305128A
  Many phenomena taking place in the solar photosphere are controlled
  by plasma motions. Although the line-of-sight component of the
  velocity can be estimated using the Doppler effect, we do not have
  direct spectroscopic access to the components that are perpendicular
  to the line of sight. These components are typically estimated using
  methods based on local correlation tracking. We have designed DeepVel,
  an end-to-end deep neural network that produces an estimation of the
  velocity at every single pixel, every time step, and at three different
  heights in the atmosphere from just two consecutive continuum images. We
  confront DeepVel with local correlation tracking, pointing out that they
  give very similar results in the time and spatially averaged cases. We
  use the network to study the evolution in height of the horizontal
  velocity field in fragmenting granules, supporting the buoyancy-braking
  mechanism for the formation of integranular lanes in these granules. We
  also show that DeepVel can capture very small vortices, so that we can
  potentially expand the scaling cascade of vortices to very small sizes
  and durations. <P />The movie attached to Fig. 3 is available at <A
  href="http://www.aanda.org/10.1051/0004-6361/201730783/olm">http://www.aanda.org</A>

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Title: First Detection of Sign-reversed Linear Polarization from
    the Forbidden [O I] 630.03 nm Line
Authors: de Wijn, A. G.; Socas-Navarro, H.; Vitas, N.
2017ApJ...836...29D    Altcode: 2017arXiv170108793D
  We report on the detection of linear polarization of the forbidden
  [O I] 630.03 nm spectral line. The observations were carried out
  in the broader context of the determination of the solar oxygen
  abundance, an important problem in astrophysics that still remains
  unresolved. We obtained spectro-polarimetric data of the forbidden
  [O I] line at 630.03 nm as well as other neighboring permitted lines
  with the Solar Optical Telescope of the Hinode satellite. A novel
  averaging technique was used, yielding very high signal-to-noise ratios
  in excess of 10<SUP>5</SUP>. We confirm that the linear polarization
  is sign-reversed compared to permitted lines as a result of the line
  being dominated by a magnetic dipole transition. Our observations
  open a new window for solar oxygen abundance studies, offering an
  alternative method to disentangle the Ni I blend from the [O I] line
  at 630.03 nm that has the advantage of simple LTE formation physics.

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Title: Numerical simulations of the quiet-sun magnetic field:
    Beyond MHD
Authors: Vitas, N.
2017psio.confE..37V    Altcode:
  No abstract at ADS

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Title: The role of partial ionization in solar chromospheric heating
Authors: Shelyag, S.; Khomenko, E.; Przybylski, D.; Vitas, N.; de
   Vicente, A.
2016AGUFMSH21E2565S    Altcode:
  The most energetic part of the Sun, its interior, due to its plasma
  parameters is hidden below the solar surface and invisible to the
  observer. Nevertheless, the solar interior generates the energy and
  provokes atmospheric magnetic activity. Despite great progress in
  both observational and simulational methods, the mechanism of energy
  transport from the solar convection zone into the upper atmosphere,
  and the upper-atmospheric heating mechanism remain the main unresolved
  problems in solar and stellar structure. In this presentation, we
  analyse the role of non-ideal plasma effects and partial ionization in
  the solar atmospheric energy transport and chromospheric heating. Using
  numerical magneto-hydrodynamic modelling we create detailed models
  of magnetic flux tubes and realistic simulations of the coupled
  solar interior and atmosphere with different levels of magnetic
  activity, which take into account the effects of partial ionisation
  and ion-neutral interaction in the solar atmospheric plasma. We show
  that compressible and incompressible oscillations in solar magnetic
  fields, indeed, are able to provide sufficient energy to compensate
  chromospheric radiative losses. Detailed radiative diagnostics of the
  simulated models is carried out to create a link between the simulations
  and observational data. This gives an opportunity to directly compare
  the simulation results with modern solar observations.

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Title: How different are the Liège and Hamburg atlases of the
    solar spectrum?
Authors: Doerr, H. -P.; Vitas, N.; Fabbian, D.
2016A&A...590A.118D    Altcode: 2016arXiv160403748D
  Context. The high-fidelity solar spectral atlas prepared by
  <A HREF="http://adsabs.harvard.edu/abs/1973apds.book.....D">
  http://adsabs.harvard.edu/abs/1973apds.book.....D</A>
  Delbouille et al. (Liège atlas, 1973) and the atlas by
  <A HREF="http://adsabs.harvard.edu/abs/1999SoPh..184..421N">
  http://adsabs.harvard.edu/abs/1999SoPh..184..421N</A> Neckel (Hamburg
  atlas, 1999, Sol. Phys., 184, 421) are widely recognised as the most
  important collection of reference spectra of the Sun at disc centre in
  the visible wavelength range. The two datasets serve as fundamental
  resources for many researchers, in particular for chemical abundance
  analyses. But despite their similar published specifications (spectral
  resolution and noise level), the shapes of the spectral lines in the
  two atlases differ significantly and systematically. <BR /> Aims:
  Knowledge of any instrumental degradations is imperative to fully
  exploit the information content of spectroscopic data. We seek to
  investigate the magnitude of these differences and explain the possible
  sources. We provide the wavelength-dependent correction parameters that
  need to be taken into account when the spectra are to be compared with
  synthetic data, for instance. <BR /> Methods: A parametrically degraded
  version of the Hamburg spectrum was fitted to the Liège spectrum. The
  parameters of the model (wavelength shift, broadening, intensity
  scaling, and intensity offset) represent the different characteristics
  of the respective instruments, observational strategies, and data
  processing. <BR /> Results: The wavelength scales of the Liège and
  Hamburg atlases differ on average by 0.5 mÅ with a standard deviation
  of ± 2 mÅ, except for a peculiar region around 5500 Å. The continuum
  levels are offset by up to 18% below 5000 Å, but remain stably at a
  0.8% difference towards the red. We find no evidence for spectral stray
  light in the Liège spectrum. Its resolving power is almost independent
  of wavelength but limited to about 216 000, which is between two to
  six times lower than specified. When accounting for the degradations
  determined in this work, the spectra of the two atlases agree to within
  a few parts in 10<SUP>3</SUP>. <P />The fit parameters displayed in
  Fig. 2 and derived data are only available at the CDS via anonymous ftp
  to <A href="http://cdsarc.u-strasbg.fr">http://cdsarc.u-strasbg.fr</A>
  (<A href="http://130.79.128.5">http://130.79.128.5</A>) or via <A
  href="http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/590/A118">http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/590/A118</A>

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Title: VizieR Online Data Catalog: Differences of atlases of solar
    spectrum (Doerr+, 2016)
Authors: Doerr, H. -P.; Vitas, N.; Fabbian, D.
2016yCat..35900118D    Altcode:
  A parametrically degraded version of the Hamburg spectrum was fitted
  to the Liege spectrum. The parameters of the model (wavelength shift,
  broadening, intensity scaling, intensity offset) represent the different
  characteristics of the respective instruments, observational strategies,
  and data processing. The fits were carried out for all identified solar
  lines in the line list provided by Pierce and Breckinridge (1973, The
  Kitt-Peak Table of Solar Spectrum Wavelengths, Vol. Contribution No. 559
  (Kitt Peak National Observatory); hereafter PB73) for an interval of
  ±15pm around the line cores. From an initial testrun we found that
  the offset parameter (stray-light) is compatible with zero. The final
  fits were carried out with only three free parameters. The results
  from that run are provided in the file 'fitres.dat'. <P />A second
  file (liegepar.dat) contains derived parameters (spectral resolving
  power, position of the continuum) for the Liege spectrum that can be
  used in studies that compare Liege data to other data (e.g. synthetic
  spectra). <P />For instance, synthetic spectra have to be degraded to
  match the spectral resolving power of the Liege spectrum for a valid
  comparison. Our analysis showed that a Gaussian convolution kernel with
  a full-width at half-maximum (FWHM) of lambda/R (lambda: wavelength; R:
  spectral resolving power) is a very good approximation to the actual
  instrumental profile of the Liege atlas. <P />Likewise, the continuum
  of the Liege atlas at a particular wavelength can be matched to the
  continuum of the Hamburg atlas by division with the parameter 'C'
  from liegepar.dat. The correction parameters in liegepar.dat should
  be interpolated to the desired wavelength range before being applied
  in any data analysis. <P />We want to stress that the parameters
  provided here result from the fitting-procedure as described in the
  paper, with no further consistency checks or corrections applied. Some
  fits are affected by nearby telluric blends. We recommend to apply an
  outlier-rejection (e.g. a median filter) and/or smoothing before using
  the data. The results need to be carefully checked. <P />(2 data files).

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Title: Fluid description of multi-component solar partially ionized
    plasma
Authors: Khomenko, E.; Collados, M.; Díaz, A.; Vitas, N.
2014PhPl...21i2901K    Altcode: 2014arXiv1408.1871K
  We derive self-consistent formalism for the description of
  multi-component partially ionized solar plasma, by means of the coupled
  equations for the charged and neutral components for an arbitrary
  number of chemical species, and the radiation field. All approximations
  and assumptions are carefully considered. Generalized Ohm's law is
  derived for the single-fluid and two-fluid formalism. Our approach is
  analytical with some order-of-magnitude support calculations. After
  general equations are developed, we particularize to some frequently
  considered cases as for the interaction of matter and radiation.

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Title: Ellerman bombs: fallacies, fads, usage
Authors: Rutten, Robert J.; Vissers, Gregal J. M.; Rouppe van der
   Voort, Luc H. M.; Sütterlin, Peter; Vitas, Nikola
2013JPhCS.440a2007R    Altcode: 2013arXiv1304.1364R
  Ellerman bombs are short-lived brightenings of the outer wings of Hα
  that occur in active regions with much flux emergence. We point out
  fads and fallacies in the extensive Ellerman bomb literature, discuss
  their appearance in various spectral diagnostics, and advocate their
  use as indicators of field reconfiguration in active-region topography
  using AIA 1700 Å images.

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Title: On The Magnetic-Field Diagnostics Potential of SDO/HMI
Authors: Fleck, Bernard; Hayashi, K.; Rezaei, R.; Vitas, N.; Centeno,
   R.; Cheung, M.; Couvidat, S.; Fischer, C.; Steiner, O.; Straus, T.;
   Viticchie, B.
2012AAS...22020701F    Altcode:
  The Helioseismic and Magnetic Imager (HMI) onboard the Solar Dynamics
  Observatory (SDO) is designed to study oscillations and the magnetic
  field in the solar photosphere. It observes the full solar disk
  in the Fe I absorption line at 6173 Å. We use the output of three
  high-resolution 3D, time-dependent, radiative magneto-hydrodynamics
  simulations (two based on the MURaM code, one on the CO<SUP>5</SUP>BOLD
  code) to calculate Stokes profiles for the Fe I 6173 Å line
  for snapshots of a sunspot, a plage area and an enhanced network
  region. Stokes filtergrams are constructed for the 6 nominal HMI
  wavelengths by multiplying the Stokes profiles with a representative
  set of HMI filter response functions. The magnetic field vector B(x,y)
  and line-of-sight Doppler velocities V(x,y) are determined from these
  filtergrams using a simplified version of the HMI magnetic field
  processing pipeline. Finally, the reconstructed magnetic field B(x,y)
  and line-of-sight velocity V(x,y) are compared to the actual magnetic
  field B<SUB>0</SUB>(x,y,z) and vertical velocity V<SUB>0</SUB>(x,y,z)
  in the simulations.

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Title: On the Magnetic-Field Diagnostics Potential of SDO/HMI
Authors: Fleck, B.; Hayashi, K.; Rezaei, R.; Vitas, N.; Centeno,
   R.; Cheung, M.; Couvidat, S.; Fischer, C.; Steiner, O.; Straus, T.;
   Viticchie, B.
2012decs.confE.104F    Altcode:
  The Helioseismic and Magnetic Imager (HMI) onboard the Solar Dynamics
  Observatory (SDO) is designed to study oscillations and the magnetic
  field in the solar photosphere. It observes the full solar disk
  in the Fe I absorption line at 6173 Å. We use the output of three
  high-resolution 3D, time-dependent, radiative magneto-hydrodynamics
  simulations (two based on the MURaM code, one on the CO5BOLD code)
  to calculate Stokes profiles Fi(λ,x,y; i=I, V, Q, U) for the Fe I
  6173 Å line for snapshots of a sunspot, a plage area and an enhanced
  network region. Stokes filtergrams are constructed for the 6 nominal
  HMI wavelengths by multiplying the Stokes profiles with a representative
  set of HMI filter response functions. The magnetic field vector B(x,y)
  and line-of-sight Doppler velocities V(x,y) are determined from these
  filtergrams using a simplified version of the HMI magnetic field
  processing pipeline. Finally, the reconstructed magnetic field B(x,y)
  and line-of-sight velocity V(x,y) are compared to the actual magnetic
  field B0(x,y,z) and vertical velocity V0(x,y,z) in the simulations.

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Title: On the Magnetic-Field Diagnostics Potential of SDO/HMI
Authors: Fleck, B.; Hayashi, K.; Rezaei, R.; Vitas, N.; Centeno, R.;
   Couvidat, S.; Fischer, C.; Steiner, O.; Straus, T.; Viticchie, B.
2011sdmi.confE..74F    Altcode:
  The Helioseismic and Magnetic Imager (HMI) onboard the Solar Dynamics
  Observatory (SDO) is designed to study oscillations and the magnetic
  field in the solar photosphere. It observes the full solar disk in the
  Fe I 6173 absorption line. We use the output of two high-resolution 3D,
  time-dependent, radiative magneto-hydrodynamics simulations (one based
  on the MURAM code, the other one on the COBOLD code) to calculate
  Stokes profiles for the Fe I 6173 line for a snapshot of a plage
  region and a snapshot of an enhanced network region. After spatially
  degrading the Stokes profiles to HMI resolution, they are multiplied
  by a representative set of HMI filter response functions and Stokes
  filtergrams are constructed for the 6 nominal HMI wavelengths. The
  magnetic field vector and line-of-sight Doppler velocities are
  determined from these filtergrams using a simplified version of the HMI
  magnetic field processing pipeline. Finally, the reconstructed magnetic
  field is compared to the actual magnetic field in the simulation.

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Title: Fast horizontal flows in a quiet sun MHD simulation and their
    spectroscopic signatures
Authors: Vitas, N.; Fischer, C. E.; Vögler, A.; Keller, C. U.
2011A&A...532A.110V    Altcode:
  Numerical simulations of solar surface convection have predicted
  the existence of supersonic horizontal flows in the photospheric
  granulation. Recently, the detection of such flows in data from the
  Hinode satellite was reported. We study supersonic granular flows in
  detail to understand their signatures in spectral lines and to test
  the observational detection method used to identify these flows in
  the Hinode observations. We perform time-dependent 3D radiative MHD
  numerical simulations and synthesize the Fe i 6302 Å spectral lines at
  the resolution of the Hinode data for different viewing angles covering
  the center-limb variation. There is very large variation in the detailed
  shape of the emergent line profiles depending on the viewing angle and
  the particular flow properties and orientation. At the full simulation
  resolution the supersonic flows can even produce distinct satellite
  lines. After smearing to the Hinode resolution sufficient signature
  of supersonic motion remains. Our analysis shows that the detection
  method used to analyze the Hinode data is indeed applicable. However,
  the detection is very sensitive to ad hoc parameter choices and can
  also misidentify supersonic flows.

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Title: Line Shape Effects on Intensity Measurements of Solar Features:
    Brightness Correction to SOHO MDI Continuum Images
Authors: Criscuoli, S.; Ermolli, I.; Del Moro, D.; Giorgi, F.;
   Tritschler, A.; Uitenbroek, H.; Vitas, N.
2011ApJ...728...92C    Altcode: 2010arXiv1012.2561C
  Continuum intensity observations obtained with the Michelson
  Doppler Imager (MDI) on board the SOHO mission provide long time
  series of filtergrams that are ideal for studying the evolution of
  large-scale phenomena in the solar atmosphere and their dependence on
  solar activity. These filtergrams, however, are not taken in a pure
  continuum spectral band, but are constructed from a proxy, namely a
  combination of filtergrams sampling the Ni I 6768 Å line. We studied
  the sensitivity of this continuum proxy to the shape of the nickel line
  and to the degradation in the instrumental transmission profiles. We
  compared continuum intensity measurements near the nickel line with
  MDI proxy values in three sets of high-resolution spectro-polarimetric
  data obtained with the Interferometric Bidimensional Spectrometer,
  and in synthetic data, obtained from multi-dimensional simulations of
  magneto-convection and one-dimensional atmosphere models. We found that
  MDI continuum measurements require brightness corrections which depend
  on magnetic field strength, temperature and, to a smaller extent, plasma
  velocity. The correction ranges from 2% to 25% in sunspots, and is,
  on average, less than 2% for other features. The brightness correction
  also varies with position on the disk, with larger variations obtained
  for sunspots, and smaller variations obtained for quiet Sun, faculae,
  and micropores. Correction factors derived from observations agree
  with those deduced from the numerical simulations when observational
  effects are taken into account. Finally, we found that the investigated
  potential uncertainties in the transmission characteristics of MDI
  filters only slightly affect the brightness correction to proxy
  measurements.

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Title: Observational signatures of the simulated solar photosphere
Authors: Vitas, N.
2011PhDT........83V    Altcode:
  Most of the visible light coming from the Sun originates in the solar
  photosphere. Numerical simulations are a common tool to study the solar
  atmosphere starting from the basic laws of physics and few additional
  assumptions. This thesis presents results of three-dimensional radiative
  magnetohydrodynamic simulations of the quiet-sun, plage and sunspot
  umbra. These simulations are used to compute synthetic observations
  that can be compared to the real observations. Each chapter of this
  thesis tackles a different problem: the solar abundance of indium, the
  formation of the only photospheric spectral line that shows activity
  variation, the formation of the spectral lines in the horizontal
  supersonic flows caused by convective motions, the center-to-limb
  variation of the emergent continuum and the spectropolarimetric
  diagnostic of the simulated sunspot umbra.

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Title: BAZA - Belgrade Astronomical Community Database
Authors: Atanackovic, O.; Vitas, N.; Arbutina, B.
2009POBeo..86..369A    Altcode:
  We present Belgrade astronomical community web site the purpose of
  which is to provide basic information about students graduated from the
  Department of Astronomy, Faculty of Mathematics, University of Belgrade,
  as well as about our current students and friends worldwide, and to
  help them communicating. BAZA (from Serbian: Beogradska Astronomska
  ZAjednica) is available at http://alas.matf.bg.ac.yu/~astrobaza/
  and http://astro.matf.bg.ac.yu/baza/.

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Title: Explanation of the activity sensitivity of Mn I 5394.7 Å
Authors: Vitas, N.; Viticchiè, B.; Rutten, R. J.; Vögler, A.
2009A&A...499..301V    Altcode: 2008arXiv0811.3555V
  There is a long-standing debate why the Mn i 5394.7 Å line in the
  solar irradiance spectrum brightens more at higher activity than
  other photospheric lines. The claim that this is caused by spectral
  interlocking to chromospheric emission in the Mg ii h &amp; k lines
  is disputed. In this paper we settle this issue, using classical
  one-dimensional modeling for demonstration and modern three-dimensional
  MHD simulation for verification and analysis. The unusual sensitivity
  of the Mn i 5394.7 Å line to solar activity is due to its excessive
  hyperfine structure. This overrides the thermal and granular Doppler
  smearing through which the other, narrower, photospheric lines lose
  such sensitivity. We take the nearby Fe i 5395.2 Å line as example
  of the latter, and analyze the formation of both lines in detail to
  demonstrate and explain the granular Doppler brightening which affects
  all narrow photospheric lines. Neither the chromosphere nor Mg ii h
  &amp; k emission play a role, nor is it correct to describe the activity
  sensitivity of Mn i 5394.7 Å in terms of plage models with outward
  increasing temperature contrast. The Mn i 5394.7 Å line represents a
  proxy diagnostic of strong-field magnetic concentrations in the deep
  solar photosphere comparable to the G band and the blue wing of Hα,
  but not a better one than these. The Mn i lines are more promising as
  diagnostics of weak fields in high-resolution Stokes polarimetry.

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Title: On the solar abundance of indium
Authors: Vitas, N.; Vince, I.; Lugaro, M.; Andriyenko, O.; Gošić,
   M.; Rutten, R. J.
2008MNRAS.384..370V    Altcode: 2008MNRAS.tmp...25V; 2007arXiv0711.2166V
  The generally adopted value for the solar abundance of indium is over
  six times higher than the meteoritic value. We address this discrepancy
  through numerical synthesis of the 451.13-nm line on which all indium
  abundance studies are based, both for the quiet Sun and the sunspot
  umbra spectrum, employing standard atmosphere models and accounting
  for hyperfine structure and Zeeman splitting in detail. The results,
  as well as a re-appraisal of indium nucleosynthesis, suggest that
  the solar indium abundance is close to the meteoritic value, and
  that some unidentified ion line causes the 451.13-nm feature in the
  quiet-Sun spectrum.

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Title: Is the Mn I 539.4 nm Variation with Activity Explained?
Authors: Vitas, N.; Vince, I.
2007ASPC..368..543V    Altcode:
  The photospheric Mn I 539.4 nm line in the solar spectrum shows unusual
  variability with the solar cycle in that its depth decreases with
  increasing activity. \citet{nv-2001A&amp;A...369L..13D} claimed that
  this phenomenon is due to interlocking between the chromospheric Mg II
  h &amp; k lines and an overlapping Mn I multiplet. In this contribution
  we test this hypothesis by synthesizing Mn I 539.4 nm line including
  these interlocking lines for a range of standard solar models and
  then combining resulting profiles without and with interlocking to
  emulate the full-disk profile variation. We find that the interlocking
  gives only a minor contribution; the largest one comes from different
  temperature stratifications in the photospheric layers of the various
  models.

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Title: Formation of Neutral Manganese Lines Potentially Suitable
    for Plasma Diagnostics
Authors: Vitas, N.; Danilović, S.; Atanacković-Vukmanović, O.;
   Vince, Ištvan
2005ESASP.600E..73V    Altcode: 2005dysu.confE..73V; 2005ESPM...11...73V
  No abstract at ADS

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Title: Time Series Analysis of Long Term Full Disk Observations Of
    The Mn I 539.4 nm Solar Line
Authors: Danilovic, S.; Vince, I.; Vitas, N.; Jovanovic, P.
2005SerAJ.170...79D    Altcode:
  The equivalent width and central depth data of Mn 539.4 nm solar
  spectral line, observed in the period from 1979 to 1992 at Kitt
  Peak Observatory, was analyzed in pursuit for periodic changes. As
  the observations are highly unevenly sampled, test if the periods
  really exist in the observed data was needed. Two different methods
  for spectral analysis were applied to synthesized data sampled in the
  same way as observations. Comparation of these results with results
  obtained from the observed data showed that the parameters display
  at least three periodic changes with the periods of: 11-years,
  quasi-biannual and 27-days.

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Title: Heights of formation of Mn I spectral lines broadened by
    hyperfine structure
Authors: Vitas, N.
2005MSAIS...7..164V    Altcode:
  This paper considers the influence of hyperfine broadening on heights
  of formation of some Mn I spectral lines in Solar spectrum. The
  comprehensive model atom of neutral manganese is constructed
  with 64 bound energy levels and continuum and 161 bound-bound
  transitions. Preliminary results of spectrum synthesis for this model
  and atmospheric models for quiet Sun and plage are obtained by using
  program MULTI. It is shown that hyperfine structure decreases the
  height of formation and narrows down the line formation region.

---------------------------------------------------------
Title: NLTE Effects in formation of variable Mn I 539.4 nm line in
    solar spectrum
Authors: Vitas, N.; Vince, I.
2005MmSAI..76.1064V    Altcode:
  On the basis of NLTE profile calculations obtained by employing the
  radiative transfer code MULTI, the influence of the uncertainties
  of various parameters important in the formation of the photospheric
  Mn I 539.4 nm spectral line are discussed. Two cases are separately
  considered: with and without energy transfer between Mg II and Mn
  I. All calculations are performed with model atmospheres of Fontenla
  et al. (1999).

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Title: The influence of hyperfine structure on the solar Mn I 543.25
    nm line profile
Authors: Vitas, N.; Vince, O.; Vince, I.
2003KFNTS...4..142V    Altcode:
  The Mn I 543.25 nm spectral line has unusually broad line profile due to
  its hyperfine structure. Here we present the results of LTE calculation
  of the synthetical profile of the Mn I 543.25 nm line in the solar
  spectrum. We used the Oxford total absorption oscillator strength
  measurements as the first approximation for hyperfine structure. The
  observed spectrum was taken from the High Resolution Solar Spectrum
  Atlas. The relative intensities of six hyperfine components were varied
  to obtain a good fit with the observed line profile.

---------------------------------------------------------
Title: The influence of hyperfine structure on some manganese line
    profiles in the solar spectrum
Authors: Vitas, N.; Vince, I.
2003SerAJ.167...35V    Altcode:
  Taking into account effects of hyperfine structure, we calculated
  the synthetic solar spectrum for wavelength intervals around nine
  neutral manganese lines. To estimate values of hyperfine components
  we used the Oxford total absorption oscillator strength measurements
  (Booth et al. 1983). We compared observed profiles (Photometric Atlas
  of the Solar Spectrum from 300 to 1000 nm (Delbouille et al. 1973))
  of selected manganese lines with synthesized profiles in two cases:
  when hyperfine structure is not and when it is taken into account. By
  comparing the calculated with observed spectrum, we corrected the
  total oscillator strengths of all nine selected manganese lines.